RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 CREBRFQ8IUR6 639 aa20.57■□□□□ 0.88
EXOSC3-201ENST00000327304 TC2NQ8N9U0 490 aa20.57■□□□□ 0.88
EXOSC3-201ENST00000327304 TUBGCP2Q9BSJ2 902 aa20.57■□□□□ 0.88
EXOSC3-201ENST00000327304 EIF3DO15371 548 aaKnown RBP eCLIP20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 SRGAP2CP0DJJ0 459 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 BMT2Q1RMZ1 405 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 ZNF507Q8TCN5 953 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 MAP7D2Q96T17 732 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 PPP1R16BQ96T49 567 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 IKZF4Q9H2S9 585 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 ST6GALNAC4Q9H4F1 302 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 STARD7Q9NQZ5 370 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 ARHGAP28Q9P2N2 729 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 PCDHB13Q9Y5F0 798 aa20.56■□□□□ 0.88
EXOSC3-201ENST00000327304 SMIM35A0A1B0GVV1 85 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 AKR1B15C9JRZ8 316 aaPredicted RBP20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 TFRCP02786 760 aaKnown RBP20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 MNX1P50219 401 aaPredicted RBP20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 GTF2BQ00403 316 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 FKBP3Q00688 224 aaKnown RBP20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 PPP4R3CPQ6ZMV5 832 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 RNF149Q8NC42 400 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 DEPTORQ8TB45 409 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 NLRP4Q96MN2 994 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 ZMYM2Q9UBW7 1377 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 DENND3A2RUS2 1198 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 TPM1P09493 284 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 UBXN1Q04323 297 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 STXBP4Q6ZWJ1 553 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 TAS1R3Q7RTX0 852 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 SLC17A8Q8NDX2 589 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 DNAJB3Q8WWF6 145 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 CEP63Q96MT8 703 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 PANX2Q96RD6 677 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 KCTD10Q9H3F6 313 aa20.55■□□□□ 0.88
EXOSC3-201ENST00000327304 UBE4BO95155 1302 aa20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 A0A0U1RQG5 324 aaPredicted RBP20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 ASAP2O43150 1006 aa20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 STX10O60499 249 aa20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 MTIF2P46199 727 aaKnown RBP20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 TMEM62Q0P6H9 643 aa20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 ALCAMQ13740 583 aa20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 LRRC55Q6ZSA7 311 aa20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 SLC43A3Q8NBI5 491 aa20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 CCDC51Q96ER9 411 aa20.54■□□□□ 0.88
EXOSC3-201ENST00000327304 PRKCSHP14314 528 aaPredicted RBP20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 PTPN11Q06124 597 aaPredicted RBP20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 TFDP1Q14186 410 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 KNOP1Q1ED39 458 aaKnown RBP20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 EDRF1Q3B7T1 1238 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 CDCA2Q69YH5 1023 aaPredicted RBP20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 TMEM139Q8IV31 216 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 CNGA4Q8IV77 575 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 WNT8BQ93098 351 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 TRMT13Q9NUP7 481 aaKnown RBP20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 KCNG1Q9UIX4 513 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 TBX20Q9UMR3 447 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 ARHGAP6O43182 974 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 GNA14O95837 355 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 GJA8P48165 433 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 GPC3P51654 580 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 RBL2Q08999 1139 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 PTGISQ16647 500 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 SERINC5Q86VE9 423 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 ZC3H3Q8IXZ2 948 aaKnown RBP20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 ACCSQ96QU6 501 aa20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 BAG1Q99933 345 aaPredicted RBP20.53■□□□□ 0.88
EXOSC3-201ENST00000327304 SIP14410 1827 aa20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 A0A087WZ62 844 aa20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 H0YCG3 227 aa20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 GYPCP04921 128 aa20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 ADKP55263 362 aaKnown RBP20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 NLRP11P59045 1033 aaKnown RBP20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 TAF2Q6P1X5 1199 aa20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 CCAR2Q8N163 923 aaKnown RBP20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 HVCN1Q96D96 273 aa20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 FDXACB1Q9BRP7 624 aaPredicted RBP20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 NOC4LQ9BVI4 516 aaKnown RBP20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 NAA15Q9BXJ9 866 aaKnown RBP20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 IFT122Q9HBG6 1241 aa20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 TRAF3IP3Q9Y228 551 aa20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 KIAA0100Q14667 2235 aaKnown RBP20.52■□□□□ 0.88
EXOSC3-201ENST00000327304 ARVCFO00192 962 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 MFAP3LO75121 409 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 PTENP60484 403 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 KIZQ2M2Z5 673 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 MIIPQ5JXC2 388 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 DNTTIP2Q5QJE6 756 aaKnown RBP20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 MAP4K3Q8IVH8 894 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 DIS3LQ8TF46 1054 aaKnown RBP20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 NLRP7Q8WX94 980 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 KCNN1Q92952 543 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 CCDC113Q9H0I3 377 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 TRPV6Q9H1D0 765 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 ADAMTS10Q9H324 1103 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 MINDY3Q9H8M7 445 aa20.51■□□□□ 0.87
EXOSC3-201ENST00000327304 TGFB1I1O43294 461 aa20.5■□□□□ 0.87
EXOSC3-201ENST00000327304 CCP110O43303 1012 aa20.5■□□□□ 0.87
EXOSC3-201ENST00000327304 GPR32O75388 356 aa20.5■□□□□ 0.87
EXOSC3-201ENST00000327304 EDN1P05305 212 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms