RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 PHYKPLQ8IUZ5 450 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 LILRA3Q8N6C8 439 aaPredicted RBP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 C7orf31Q8N865 590 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 PPP1R14CQ8TAE6 165 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 RTF1Q92541 710 aaKnown RBP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 NAF1Q96HR8 494 aaKnown RBP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 PDCD2LQ9BRP1 358 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 NOL10Q9BSC4 688 aaKnown RBP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 SLC46A2Q9BY10 475 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 SERHL2Q9H4I8 314 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 CYP4F11Q9HBI6 524 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 CABP5Q9NP86 173 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 ANKFY1Q9P2R3 1169 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 B4GALT6Q9UBX8 382 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 TMEM200CA6NKL6 621 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 NRP1O14786 923 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 DNAJC6O75061 913 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 MAN2A1Q16706 1144 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 METTL24Q5JXM2 366 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 PIK3R6Q5UE93 754 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 STRIP1Q5VSL9 837 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 SYCE2Q6PIF2 218 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 UNC5BQ8IZJ1 945 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 LILRB2Q8N423 598 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 OR5M3Q8NGP4 307 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 C8orf37Q96NL8 207 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 NDC1Q9BTX1 674 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 WDR11Q9BZH6 1224 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 EPC1Q9H2F5 836 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 R3HDMLQ9H3Y0 253 aa4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 ADARB2Q9NS39 739 aaKnown RBP4.69□□□□□ -1.66
CBX3P1-201ENST00000325243 CBX4O00257 560 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 LEFTY2O00292 366 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 OPA1O60313 960 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 NCR1O76036 304 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 ASLP04424 464 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 RANGAP1P46060 587 aaPredicted RBP4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 TAP1Q03518 808 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 CD69Q07108 199 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 ADCY1Q08828 1119 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 MRPL49Q13405 166 aaKnown RBP4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 TIGD7Q6NT04 549 aaPredicted RBP4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 CCDC62Q6P9F0 684 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 GLB1L3Q8NCI6 653 aaPredicted RBP4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 MKL1Q969V6 931 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 HIST1H2AHQ96KK5 128 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 HIST1H2AJQ99878 128 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 ZMAT4Q9H898 229 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 SYBUQ9NX95 663 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 TRPM5Q9NZQ8 1165 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 CHST2Q9Y4C5 530 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 SPO11Q9Y5K1 396 aa4.68□□□□□ -1.66
CBX3P1-201ENST00000325243 ELL2O00472 640 aaPredicted RBP4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 PCDH8O95206 1070 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 LY86O95711 162 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 TYRP1P17643 537 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 ATXN1P54253 815 aaKnown RBP4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 FNDC3BQ53EP0 1204 aaKnown RBP4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 IQSEC1Q6DN90 963 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 DOK3Q7L591 496 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 GDF7Q7Z4P5 450 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 FAM83AQ86UY5 434 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 XYLT1Q86Y38 959 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 ARHGEF19Q8IW93 802 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 MSL3Q8N5Y2 521 aaKnown RBP4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 IL17RAQ96F46 866 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 FDXACB1Q9BRP7 624 aaPredicted RBP4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 TEX101Q9BY14 249 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 AKIP1Q9NQ31 210 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 TOMM22Q9NS69 142 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 OXSMQ9NWU1 459 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 PODXL2Q9NZ53 605 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 H2AFY2Q9P0M6 372 aaPredicted RBP4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 DKK2Q9UBU2 259 aa4.67□□□□□ -1.66
CBX3P1-201ENST00000325243 POLR2AP24928 1970 aaKnown RBP4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 MAFGO15525 162 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 NDUFA10O95299 355 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 JMJD7P0C870 316 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 SDSP20132 328 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 USP14P54578 494 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 RD3Q7Z3Z2 195 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 GLCCI1Q86VQ1 547 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 SYT12Q8IV01 421 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 CMTR2Q8IYT2 770 aaKnown RBP4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 SUPT20HQ8NEM7 779 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 INTS7Q9NVH2 962 aaKnown RBP4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 PCDHB6Q9Y5E3 794 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 EPN1Q9Y6I3 576 aaPredicted RBP4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 COX11Q9Y6N1 276 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 MYPNQ86TC9 1320 aa4.66□□□□□ -1.66
CBX3P1-201ENST00000325243 RNASET2O00584 256 aaKnown RBP4.65□□□□□ -1.67
CBX3P1-201ENST00000325243 ATP2A2P16615 1042 aaKnown RBP4.65□□□□□ -1.67
CBX3P1-201ENST00000325243 ZSCAN20P17040 1043 aaPredicted RBP4.65□□□□□ -1.67
CBX3P1-201ENST00000325243 CD38P28907 300 aa4.65□□□□□ -1.67
CBX3P1-201ENST00000325243 PTH2RP49190 550 aa4.65□□□□□ -1.67
CBX3P1-201ENST00000325243 GZMKP49863 264 aa4.65□□□□□ -1.67
CBX3P1-201ENST00000325243 WNT3AP56704 352 aa4.65□□□□□ -1.67
CBX3P1-201ENST00000325243 KRTAP10-11P60412 298 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms