RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GOLGA8IPA6NC78 632 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 GOLGA8JA6NMD2 632 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
PRPF3-201ENST00000324862 AKAP3O75969 853 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 PRKCBP05771 671 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 FKBP3Q00688 224 aaKnown RBP16.75■□□□□ 0.27
PRPF3-201ENST00000324862 STRN3Q13033 797 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 TFDP1Q14186 410 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 SEZ6Q53EL9 994 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 CEP135Q66GS9 1140 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 SESTD1Q86VW0 696 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 SAAL1Q96ER3 474 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 ANKFY1Q9P2R3 1169 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 UBE4BO95155 1302 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 LAMA2P24043 3122 aaKnown RBP16.74■□□□□ 0.27
PRPF3-201ENST00000324862 KCNJ18B7U540 433 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 ASAP2O43150 1006 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 HARSP12081 509 aaKnown RBP16.74■□□□□ 0.27
PRPF3-201ENST00000324862 ALCAMQ13740 583 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 KCNJ12Q14500 433 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 HS2ST1Q7LGA3 356 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 APTXQ7Z2E3 356 aaKnown RBP16.74■□□□□ 0.27
PRPF3-201ENST00000324862 ZBTB8OSQ8IWT0 167 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 CPB2Q96IY4 423 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 CNOT6LQ96LI5 555 aaKnown RBP16.74■□□□□ 0.27
PRPF3-201ENST00000324862 NOD1Q9Y239 953 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 PHLPP2Q6ZVD8 1323 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 CALUO43852 315 aaPredicted RBP16.74■□□□□ 0.27
PRPF3-201ENST00000324862 THPOP40225 353 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 FANCCQ00597 558 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 MAPK6Q16659 721 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 AMHR2Q16671 573 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 UVSSAQ2YD98 709 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 FZD8Q9H461 694 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 TMEM134Q9H6X4 195 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 TAB2Q9NYJ8 693 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 IFNKQ9P0W0 207 aa16.74■□□□□ 0.27
PRPF3-201ENST00000324862 A0A0U1RQG5 324 aaPredicted RBP16.73■□□□□ 0.27
PRPF3-201ENST00000324862 ARVCFO00192 962 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 PHKA2P46019 1235 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 LIG4P49917 911 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 KRT31Q15323 416 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 EDRF1Q3B7T1 1238 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 ZBTB41Q5SVQ8 909 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 ARMCX5Q6P1M9 558 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 SLC43A3Q8NBI5 491 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 SLC17A8Q8NDX2 589 aa16.73■□□□□ 0.27
PRPF3-201ENST00000324862 CHRNA1P02708 482 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 GJA8P48165 433 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 EEF1DP3Q658K8 133 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 TAF2Q6P1X5 1199 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 ZBTB33Q86T24 672 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 VPS16Q9H269 839 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 THAP9Q9H5L6 903 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 INTS13Q9NVM9 706 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 HSPBP1Q9NZL4 362 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 CDY2AQ9Y6F7 541 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 PQBP1O60828 265 aaKnown RBP16.72■□□□□ 0.27
PRPF3-201ENST00000324862 ADCY5O95622 1261 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 SERPINC1P01008 464 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 EFNA5P52803 228 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
PRPF3-201ENST00000324862 POMGNT1Q8WZA1 660 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 FAM84AQ96KN4 292 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 TRIM5Q9C035 493 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 XPO4Q9C0E2 1151 aaKnown RBP16.72■□□□□ 0.27
PRPF3-201ENST00000324862 C2orf40Q9H1Z8 148 aa16.72■□□□□ 0.27
PRPF3-201ENST00000324862 ACKR2O00590 384 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 TPM4P67936 248 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 PRPF4BQ13523 1007 aaKnown RBP16.71■□□□□ 0.27
PRPF3-201ENST00000324862 SNX17Q15036 470 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 ZNF410Q86VK4 478 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 HVCN1Q96D96 273 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 DMAC2Q9NW81 257 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 EXOC7Q9UPT5 735 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 H0YCG3 227 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 CETN3O15182 167 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 EXOC3O60645 756 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 DARSP14868 501 aaKnown RBP16.71■□□□□ 0.27
PRPF3-201ENST00000324862 ARF4P18085 180 aaPredicted RBP16.71■□□□□ 0.27
PRPF3-201ENST00000324862 CDK7P50613 346 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 MRPS6P82932 125 aaKnown RBP16.71■□□□□ 0.27
PRPF3-201ENST00000324862 CBWD2Q8IUF1 395 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 CEP120Q8N960 986 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 PAWRQ96IZ0 340 aaKnown RBP16.71■□□□□ 0.27
PRPF3-201ENST00000324862 ACO2Q99798 780 aaKnown RBP16.71■□□□□ 0.27
PRPF3-201ENST00000324862 NFKBIZQ9BYH8 718 aa16.71■□□□□ 0.27
PRPF3-201ENST00000324862 TEX33O43247 280 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 TSPAN1O60635 241 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 EIF4BP23588 611 aaKnown RBP16.7■□□□□ 0.26
PRPF3-201ENST00000324862 MATR3P43243 847 aaKnown RBP eCLIP16.7■□□□□ 0.26
PRPF3-201ENST00000324862 ACOT2P49753 483 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 TMEM132AQ24JP5 1023 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
PRPF3-201ENST00000324862 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
PRPF3-201ENST00000324862 CCDC155Q8N6L0 562 aa16.7■□□□□ 0.26
PRPF3-201ENST00000324862 TCHPQ9BT92 498 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms