RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 WDR19Q8NEZ3 1342 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 PDCD11Q14690 1871 aaKnown RBP7.66□□□□□ -1.18
CSTF3-201ENST00000323959 PLIN4Q96Q06 1357 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 DKK1O94907 266 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 CNPP09543 421 aaKnown RBP7.66□□□□□ -1.18
CSTF3-201ENST00000323959 RPS6P62753 249 aaKnown RBP7.66□□□□□ -1.18
CSTF3-201ENST00000323959 FAM193AP78312 1265 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 IKQ13123 557 aaPredicted RBP7.66□□□□□ -1.18
CSTF3-201ENST00000323959 PMS2CLQ68D20 193 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 UBE2Q2Q8WVN8 375 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 AUTS2Q8WXX7 1259 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 IRF7Q92985 503 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 IPO9Q96P70 1041 aaKnown RBP7.66□□□□□ -1.18
CSTF3-201ENST00000323959 CLIP2Q9UDT6 1046 aa7.66□□□□□ -1.18
CSTF3-201ENST00000323959 RBAK-RBAKDNI3L0D1 243 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 ATG13O75143 517 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 CDC45O75419 566 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 HNRNPA1P09651 372 aaKnown RBP eCLIP7.65□□□□□ -1.18
CSTF3-201ENST00000323959 TGFB3P10600 412 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 PDE1AP54750 535 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 GPR65Q8IYL9 337 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 CMTR1Q8N1G2 835 aaKnown RBP7.65□□□□□ -1.18
CSTF3-201ENST00000323959 IGSF21Q96ID5 467 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 PCNX2A6NKB5 2137 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 ANP32AP39687 249 aaKnown RBP7.65□□□□□ -1.18
CSTF3-201ENST00000323959 IRX4P78413 519 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 RCSD1Q6JBY9 416 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 NME8Q8N427 588 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 HERC2P3Q9BVR0 1158 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 RXFP1Q9HBX9 757 aa7.65□□□□□ -1.18
CSTF3-201ENST00000323959 TNRC6BQ9UPQ9 1833 aaKnown RBP7.65□□□□□ -1.18
CSTF3-201ENST00000323959 ITPR3Q14573 2671 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 TTLL1O95922 423 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 FGFR1P11362 822 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 HLA-EP13747 358 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 GSPT1P15170 499 aaKnown RBP7.65□□□□□ -1.19
CSTF3-201ENST00000323959 ENGP17813 658 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 CXADRP78310 365 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 RABEPKQ7Z6M1 372 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 RHPN1Q8TCX5 695 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 ADAM2Q99965 735 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 CELF4Q9BZC1 486 aaKnown RBP7.65□□□□□ -1.19
CSTF3-201ENST00000323959 MRPL17Q9NRX2 175 aaKnown RBP7.65□□□□□ -1.19
CSTF3-201ENST00000323959 DNAAF2Q9NVR5 837 aaKnown RBP7.65□□□□□ -1.19
CSTF3-201ENST00000323959 PIAS3Q9Y6X2 628 aa7.65□□□□□ -1.19
CSTF3-201ENST00000323959 LOC400499M0QZD8 3231 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 IDH1O75874 414 aaKnown RBP7.64□□□□□ -1.19
CSTF3-201ENST00000323959 GGPS1O95749 300 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 CD59P13987 128 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 METAP2P50579 478 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSTF3-201ENST00000323959 TMPRSS3P57727 454 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 SLC23A3Q6PIS1 610 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 FAM26EQ8N5C1 309 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 SNRNP27Q8WVK2 155 aaKnown RBP7.64□□□□□ -1.19
CSTF3-201ENST00000323959 DNAJB3Q8WWF6 145 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 FGF13Q92913 245 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 ARID3AQ99856 593 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 TRIM4Q9C037 500 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 LNPKQ9C0E8 428 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 GDE1Q9NZC3 331 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 SLC8A2Q9UPR5 921 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 KAT6AQ92794 2004 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 ATG2BQ96BY7 2078 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 SRGAP3O43295 1099 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 ZNF862O60290 1169 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 MGEA5O60502 916 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 MX1P20591 662 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 HOXA9P31269 272 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 ZAP70P43403 619 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 DSC3Q14574 896 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 HSDL1Q3SXM5 330 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 BROXQ5VW32 411 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 BTNL9Q6UXG8 535 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 BRD9Q9H8M2 597 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 TUBE1Q9UJT0 475 aa7.64□□□□□ -1.19
CSTF3-201ENST00000323959 RRN3P2A6NIE6 340 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 GPR182O15218 404 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 ZMYND10O75800 440 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 TLE3Q04726 772 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 PEAR1Q5VY43 1037 aaPredicted RBP7.63□□□□□ -1.19
CSTF3-201ENST00000323959 CEP76Q8TAP6 659 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 PI4K2BQ8TCG2 481 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 SNX21Q969T3 373 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 UPF2Q9HAU5 1272 aaKnown RBP7.63□□□□□ -1.19
CSTF3-201ENST00000323959 CDHR5Q9HBB8 845 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 ZBTB47Q9UFB7 747 aaPredicted RBP7.63□□□□□ -1.19
CSTF3-201ENST00000323959 PA2G4Q9UQ80 394 aaKnown RBP7.63□□□□□ -1.19
CSTF3-201ENST00000323959 STK24Q9Y6E0 443 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 RASA1P20936 1047 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 PBX3P40426 434 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 SLC1A4P43007 532 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 MAPK8P45983 427 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 CREMQ03060 361 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 LRRC4CQ9HCJ2 640 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 MTMR4Q9NYA4 1195 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 EBF1Q9UH73 591 aa7.63□□□□□ -1.19
CSTF3-201ENST00000323959 ASCC3Q8N3C0 2202 aaKnown RBP7.62□□□□□ -1.19
CSTF3-201ENST00000323959 ATXN3P54252 364 aaPredicted RBP7.62□□□□□ -1.19
CSTF3-201ENST00000323959 PPFIA1Q13136 1202 aa7.62□□□□□ -1.19
CSTF3-201ENST00000323959 TRIM61Q5EBN2 209 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms