RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ZNF185O15231 689 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 RTN2O75298 545 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 ROR1Q01973 937 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 E4F1Q66K89 784 aaPredicted RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM67Q6ZTA4 783 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 BEGAINQ9BUH8 593 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM28Q13263 835 aaKnown RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 SBK1Q52WX2 424 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 RSBN1LQ6PCB5 846 aaPredicted RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 FAM205CA6NFA0 338 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 F5H6K3 240 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 SPAG7O75391 227 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 KLRC3Q07444 240 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM72Q6ZMU5 477 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 SP8Q8IXZ3 490 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 FBXL5Q9UKA1 691 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 NVLO15381 856 aaKnown RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 TRPA1O75762 1119 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 KRT38O76015 456 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 CATSPER4Q7RTX7 472 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 GLYCTKQ8IVS8 523 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 RHOT1Q8IXI2 618 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 SNX12Q9UMY4 172 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 CCDC195A0A1B0GUA6 201 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 STMN1P16949 149 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 ANTXR2P58335 489 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 EPHA7Q15375 998 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 MYLK4Q86YV6 388 aaPredicted RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 CCSER1Q9C0I3 900 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 FAM96AQ9H5X1 160 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 RHOBTB3O94955 611 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 MX2P20592 715 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 XPAP23025 273 aaPredicted RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 MDM2Q00987 491 aaPredicted RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 FSCBQ5H9T9 825 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 TUBE1Q9UJT0 475 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 KIF20BQ96Q89 1820 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 PDS5AQ29RF7 1337 aaKnown RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 GYG2O15488 501 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM49P0CI25 452 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM49CP0CI26 452 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 CIITAP33076 1130 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 KRT17Q04695 432 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 YWHAHQ04917 246 aaPredicted RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 MMS22LQ6ZRQ5 1243 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 COG1Q8WTW3 980 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 LRRC1Q9BTT6 524 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 MRPL4Q9BYD3 311 aaKnown RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 APOBEC2Q9Y235 224 aaKnown RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 KITP10721 976 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 KRT10P13645 584 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 AP3M2P53677 418 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 VSNL1P62760 191 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 TAP1Q03518 808 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 GPS1Q13098 491 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 AP1ARQ63HQ0 302 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 FAM47EQ6ZV65 393 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 BEST2Q8NFU1 509 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 SPATS2LQ9NUQ6 558 aaKnown RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 PPARGC1AQ9UBK2 798 aaKnown RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 SUGT1Q9Y2Z0 365 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 KPNA7A9QM74 516 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 CHEK2O96017 543 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 PDIA2Q13087 525 aaKnown RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 RHPN2Q8IUC4 686 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 THEM5Q8N1Q8 247 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 SPATA4Q8NEY3 305 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM9Q9C026 710 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 KLHL8Q9P2G9 620 aaPredicted RBP11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 HEY1Q9Y5J3 304 aa11.62□□□□□ -0.55
SNRNP200-201ENST00000323853 STXBP3O00186 592 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 HPS3Q969F9 1004 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 FAM49AQ9H0Q0 323 aaPredicted RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 CSF1RP07333 972 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 WDR75Q8IWA0 830 aaKnown RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 ZBED8Q8IZ13 594 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 C1orf54Q8WWF1 131 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 ANLNQ9NQW6 1124 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 FLT1P17948 1338 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 MGEA5O60502 916 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 KRT7P08729 469 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 YWHABP31946 246 aaKnown RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 PSMC1P62191 440 aaKnown RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 KIF19Q2TAC6 998 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 LRIG3Q6UXM1 1119 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 EXT2Q93063 718 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 CENPKQ9BS16 269 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 TIPINQ9BVW5 301 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 ZHX2Q9Y6X8 837 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 DIP2CQ9Y2E4 1556 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 ZBTB24O43167 697 aaPredicted RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 CHGBP05060 677 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 PMLP29590 882 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 ESRRGP62508 458 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 PHEXP78562 749 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms