RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 TRMT10CQ7L0Y3 403 aaKnown RBP15.77■□□□□ 0.11
TCOF1-201ENST00000323668 FBXL13Q8NEE6 735 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.77■□□□□ 0.119e-9■■□□□ 13.4
TCOF1-201ENST00000323668 CFAP61Q8NHU2 1237 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 SAAL1Q96ER3 474 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 MED15Q96RN5 788 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 FAM153AQ9UHL3 310 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 WDR64B1ANS9 1081 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 DCTN3O75935 186 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 CASP4P49662 377 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 MYO1EQ12965 1108 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 PDIK1LQ8N165 341 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 C3orf20Q8ND61 904 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 CDHR1Q96JP9 859 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 CRAMP1Q96RY5 1269 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 PABPC3Q9H361 631 aaKnown RBP15.76■□□□□ 0.11
TCOF1-201ENST00000323668 UVRAGQ9P2Y5 699 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 GJA3Q9Y6H8 435 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 WDR91A4D1P6 747 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 JAK3P52333 1124 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 GIT2Q14161 759 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 BBS9Q3SYG4 887 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 MTERF2Q49AM1 385 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 MDM1Q8TC05 714 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 RBM41Q96IZ5 413 aaKnown RBP15.76■□□□□ 0.11
TCOF1-201ENST00000323668 TCP11X1B4DZS4 312 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 K7ERI5 159 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 ATP5HO75947 161 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 AKAP3O75969 853 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 ASNSP08243 561 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 COMTP21964 271 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 RFX6Q8HWS3 928 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 RNF25Q96BH1 459 aaPredicted RBP15.76■□□□□ 0.11
TCOF1-201ENST00000323668 KCND2Q9NZV8 630 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 DBR1Q9UK59 544 aaKnown RBP15.76■□□□□ 0.11
TCOF1-201ENST00000323668 TNS2Q63HR2 1409 aa15.76■□□□□ 0.11
TCOF1-201ENST00000323668 RSPH10B2B2RC85 870 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 EPHB6O15197 1021 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 RSPH10BP0C881 870 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 PLS3P13797 630 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 HNRNPH3P31942 346 aaKnown RBP15.75■□□□□ 0.11
TCOF1-201ENST00000323668 COPB2P35606 906 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 POLR3CQ9BUI4 534 aaPredicted RBP15.75■□□□□ 0.11
TCOF1-201ENST00000323668 AS3MTQ9HBK9 375 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 SCP2P22307 547 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 BASP1P80723 227 aaKnown RBP15.75■□□□□ 0.11
TCOF1-201ENST00000323668 MOXD1Q6UVY6 613 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 HHIPL2Q6UWX4 724 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 MAP7D3Q8IWC1 876 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 MCPH1Q8NEM0 835 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 EHD4Q9H223 541 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 ETNK1Q9HBU6 452 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 SLC40A1Q9NP59 571 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 CCT8L1PA6NM43 557 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 FGRP09769 529 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 NPEPPSP55786 919 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 SARNPP82979 210 aaKnown RBP15.75■□□□□ 0.11
TCOF1-201ENST00000323668 SLC20A2Q08357 652 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 RINT1Q6NUQ1 792 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 C4orf32Q8N8J7 132 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 ATL2Q8NHH9 583 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 HAUS1Q96CS2 278 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 FAM213AQ9BRX8 229 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 MIS12Q9H081 205 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 KIAA1586Q9HCI6 787 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 ARHGAP42A6NI28 874 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 SLC8A3P57103 927 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 SKOR1P84550 965 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 MAPK7Q13164 816 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 ENOSF1Q7L5Y1 443 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 RHOT1Q8IXI2 618 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 SGSM3Q96HU1 749 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 TUBB6Q9BUF5 446 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 THAP2Q9H0W7 228 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 ECT2Q9H8V3 914 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 FMN2Q9NZ56 1722 aa15.75■□□□□ 0.11
TCOF1-201ENST00000323668 RAD17O75943 681 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 MMP10P09238 476 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 CD58P19256 250 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 KCNJ1P48048 391 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 KCNK18Q7Z418 384 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 RAPGEF5Q92565 580 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 TTC25Q96NG3 672 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 LRRC37BQ96QE4 947 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 MTMR9Q96QG7 549 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 RMDN3Q96TC7 470 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 GDF3Q9NR23 364 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 HSPBP1Q9NZL4 362 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 MAD1L1Q9Y6D9 718 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 MCF2LO15068 1137 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 CLDN3O15551 220 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 BAG2O95816 211 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 PSAPP07602 524 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 ITIH2P19823 946 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
TCOF1-201ENST00000323668 RASA3Q14644 834 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 BSPRYQ5W0U4 402 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 PASD1Q8IV76 773 aa15.74■□□□□ 0.11
TCOF1-201ENST00000323668 FBXO41Q8TF61 875 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms