RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 TLR2O60603 784 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 ARHGAP25P42331 645 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 MAP2K5Q13163 448 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 ACVR2BQ13705 512 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 SNRNP35Q16560 246 aaKnown RBP19.43■□□□□ 0.7
RAB39A-201ENST00000320578 ARHGAP29Q52LW3 1261 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 TXLNBQ8N3L3 684 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 ZNF592Q92610 1267 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 L2HGDHQ9H9P8 463 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 CPA4Q9UI42 421 aa19.43■□□□□ 0.7
RAB39A-201ENST00000320578 RBAK-RBAKDNI3L0D1 243 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 ASAP2O43150 1006 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 JAM2P57087 298 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 MYL7Q01449 175 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 SREBF2Q12772 1141 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 SPA17Q15506 151 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 CDCA2Q69YH5 1023 aaPredicted RBP19.42■□□□□ 0.7
RAB39A-201ENST00000320578 GPD1LQ8N335 351 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 EHBP1Q8NDI1 1231 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 NPLOC4Q8TAT6 608 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 PSPC1Q8WXF1 523 aaKnown RBP19.42■□□□□ 0.7
RAB39A-201ENST00000320578 DNAI1Q9UI46 699 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 MCM3APO60318 1980 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 COL1A2P08123 1366 aa19.42■□□□□ 0.7
RAB39A-201ENST00000320578 RIOK3O14730 519 aaKnown RBP19.41■□□□□ 0.7
RAB39A-201ENST00000320578 LGALS2P05162 132 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 ACTN1P12814 892 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 EIF4A3P38919 411 aaKnown RBP19.41■□□□□ 0.7
RAB39A-201ENST00000320578 PRKCIP41743 596 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 GNG11P61952 73 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 CAPSQ13938 189 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 CBWD6Q4V339 395 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 CBWD3Q5JTY5 395 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 CBWD5Q5RIA9 395 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 C1orf220Q5T0J3 134 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 TRIM50Q86XT4 487 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 RDH13Q8NBN7 331 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 PRPF31Q8WWY3 499 aaKnown RBP19.41■□□□□ 0.7
RAB39A-201ENST00000320578 POMGNT1Q8WZA1 660 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 USP6NLQ92738 828 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 TSGA10Q9BZW7 698 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 C2orf40Q9H1Z8 148 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 ZFYVE28Q9HCC9 887 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 LRRIQ4A6NIV6 560 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 FAM155AB1AL88 458 aaPredicted RBP19.41■□□□□ 0.7
RAB39A-201ENST00000320578 EXTL3O43909 919 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 TRIM49P0CI25 452 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 TRIM49CP0CI26 452 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 ADCYAP1R1P41586 468 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 LIG4P49917 911 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 KIF11P52732 1056 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 POU5F1BQ06416 359 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 ASIC2Q16515 512 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 TMEM63BQ5T3F8 832 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 ZPBP2Q6X784 338 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 LMO3Q8TAP4 145 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 PARD3BQ8TEW8 1205 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 BICD1Q96G01 975 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 SPAG5Q96R06 1193 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 STK33Q9BYT3 514 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 INTS2Q9H0H0 1204 aaKnown RBP19.41■□□□□ 0.7
RAB39A-201ENST00000320578 FHOD1Q9Y613 1164 aa19.41■□□□□ 0.7
RAB39A-201ENST00000320578 MAGEB2O15479 319 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 LDHAP00338 332 aaKnown RBP19.4■□□□□ 0.7
RAB39A-201ENST00000320578 ADRB2P07550 413 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 MARK3P27448 753 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 VAV2P52735 878 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
RAB39A-201ENST00000320578 EPC2Q52LR7 807 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 DEF6Q9H4E7 631 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 LZTFL1Q9NQ48 299 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 TRPC6Q9Y210 931 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 COQ4Q9Y3A0 265 aa19.4■□□□□ 0.7
RAB39A-201ENST00000320578 KRT86O43790 486 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 AKR1B10O60218 316 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 CASQ1P31415 396 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 TM4SF4P48230 202 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 CYP24A1Q07973 514 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 PPP3CAQ08209 521 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 LAMTOR4Q0VGL1 99 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 RAPGEF1Q13905 1077 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 TFDP1Q14186 410 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 OLFML2BQ68BL8 750 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 IRF2BP2Q7Z5L9 587 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 CBWD2Q8IUF1 395 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 PLEKHO2Q8TD55 490 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 AFG1LQ8WV93 481 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 NFKBIZQ9BYH8 718 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 APEX2Q9UBZ4 518 aa19.39■□□□□ 0.7
RAB39A-201ENST00000320578 ZNF215Q9UL58 517 aaPredicted RBP19.39■□□□□ 0.7
RAB39A-201ENST00000320578 SIP14410 1827 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 ZNF233A6NK53 670 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 PLEKP08567 350 aaPredicted RBP19.39■□□□□ 0.69
RAB39A-201ENST00000320578 SMPD1P17405 629 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 DLG4P78352 724 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 CLDN10P78369 228 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 APBA1Q02410 837 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 IQCEQ6IPM2 695 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 KIAA1328Q86T90 577 aa19.39■□□□□ 0.69
RAB39A-201ENST00000320578 ZBTB8OSQ8IWT0 167 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms