RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SRGAP1Q7Z6B7 1085 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 ZNF280BQ86YH2 543 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 PLCD3Q8N3E9 789 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 ZNF579Q8NAF0 562 aaKnown RBP15.92■□□□□ 0.14
RPP40-201ENST00000319533 SLC7A3Q8WY07 619 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 TMEM175Q9BSA9 504 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 PHF20Q9BVI0 1012 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 WRAP73Q9P2S5 460 aaPredicted RBP15.92■□□□□ 0.14
RPP40-201ENST00000319533 INPP5FQ9Y2H2 1132 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 CNTNAP2Q9UHC6 1331 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 ZFHX2Q9C0A1 2572 aaPredicted RBP15.91■□□□□ 0.14
RPP40-201ENST00000319533 DENND4AQ7Z401 1863 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 MYO15AQ9UKN7 3530 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 PROB1E7EW31 1015 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 TBX3O15119 743 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 GALR2O43603 387 aaPredicted RBP15.91■□□□□ 0.14
RPP40-201ENST00000319533 DDHD2O94830 711 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 CA8P35219 290 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 RNASELQ05823 741 aaKnown RBP15.91■□□□□ 0.14
RPP40-201ENST00000319533 LETM2Q2VYF4 491 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 KANK3Q6NY19 840 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 GPR149Q86SP6 731 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 C4orf19Q8IY42 314 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 TDRD5Q8NAT2 981 aaKnown RBP15.91■□□□□ 0.14
RPP40-201ENST00000319533 SPDYE1Q8NFV5 336 aaPredicted RBP15.91■□□□□ 0.14
RPP40-201ENST00000319533 PRPF31Q8WWY3 499 aaKnown RBP15.91■□□□□ 0.14
RPP40-201ENST00000319533 PSPC1Q8WXF1 523 aaKnown RBP15.91■□□□□ 0.14
RPP40-201ENST00000319533 HAS1Q92839 578 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 CEP170P1Q96L14 293 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 KLHL5Q96PQ7 755 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 MINDY3Q9H8M7 445 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 KANSL3Q9P2N6 904 aa15.91■□□□□ 0.14
RPP40-201ENST00000319533 INPPL1O15357 1258 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 ASAP2O43150 1006 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 GAS2O43903 313 aaKnown RBP15.9■□□□□ 0.14
RPP40-201ENST00000319533 ALDH2P05091 517 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 CLCN4P51793 760 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 AFF1P51825 1210 aaKnown RBP15.9■□□□□ 0.14
RPP40-201ENST00000319533 LAMTOR4Q0VGL1 99 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 EPHA7Q15375 998 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 NEK8Q86SG6 692 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 CABP7Q86V35 215 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 TMEM87AQ8NBN3 555 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 URGCPQ8TCY9 931 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 SMOC2Q9H3U7 446 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 SFXN1Q9H9B4 322 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 RSAD1Q9HA92 442 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 LIMD1Q9UGP4 676 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 KCNJ14Q9UNX9 436 aa15.9■□□□□ 0.14
RPP40-201ENST00000319533 EFEMP2O95967 443 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 ASGR2P07307 311 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 CNPP09543 421 aaKnown RBP15.89■□□□□ 0.13
RPP40-201ENST00000319533 NCLP19338 710 aaKnown RBP15.89■□□□□ 0.13
RPP40-201ENST00000319533 SPIRE1Q08AE8 756 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 PCBP1Q15365 356 aaKnown RBP eCLIP15.89■□□□□ 0.13
RPP40-201ENST00000319533 C15orf39Q6ZRI6 1047 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 TMEM105Q8N8V8 129 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 CNNM3Q8NE01 707 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 FEZF2Q8TBJ5 459 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 TCP11Q8WWU5 503 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 ATOH1Q92858 354 aaPredicted RBP15.89■□□□□ 0.13
RPP40-201ENST00000319533 TMEM143Q96AN5 459 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 NAP1L4Q99733 375 aaKnown RBP15.89■□□□□ 0.13
RPP40-201ENST00000319533 LARP6Q9BRS8 491 aaKnown RBP15.89■□□□□ 0.13
RPP40-201ENST00000319533 EMILIN2Q9BXX0 1053 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 RHOBTB2Q9BYZ6 727 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 GBP3Q9H0R5 595 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 FAM86C1Q9NVL1 165 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 DBR1Q9UK59 544 aaKnown RBP15.89■□□□□ 0.13
RPP40-201ENST00000319533 FAN1Q9Y2M0 1017 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 STK36Q9NRP7 1315 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 DMDP11532 3685 aa15.89■□□□□ 0.13
RPP40-201ENST00000319533 CCDC194A0A1B0GVG4 234 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 NRP1O14786 923 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 GFRA3O60609 400 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 PAPLNO95428 1278 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 SRGAP2CP0DJJ0 459 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 YWHABP31946 246 aaKnown RBP15.88■□□□□ 0.13
RPP40-201ENST00000319533 CLCN5P51795 746 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 STK3Q13188 491 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 TMC5Q6UXY8 1006 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 OTUD6AQ7L8S5 288 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 FERMT3Q86UX7 667 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 IFNLR1Q8IU57 520 aaPredicted RBP15.88■□□□□ 0.13
RPP40-201ENST00000319533 RNF168Q8IYW5 571 aaPredicted RBP15.88■□□□□ 0.13
RPP40-201ENST00000319533 SMG8Q8ND04 991 aaKnown RBP15.88■□□□□ 0.13
RPP40-201ENST00000319533 CMASQ8NFW8 434 aaPredicted RBP15.88■□□□□ 0.13
RPP40-201ENST00000319533 LXNQ9BS40 222 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 UBN1Q9NPG3 1134 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 PDRG1Q9NUG6 133 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 PLXNA3P51805 1871 aa15.88■□□□□ 0.13
RPP40-201ENST00000319533 CFAP54Q96N23 3096 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 H0Y858 1186 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 CDKL5O76039 1030 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 SOD2P04179 222 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 KLRC2P26717 231 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 AXLP30530 894 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 POU5F1BQ06416 359 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 SCRN1Q12765 414 aa15.87■□□□□ 0.13
RPP40-201ENST00000319533 EMC2Q15006 297 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms