RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 LRRIQ3A6PVS8 624 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 EXTL3O43909 919 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 MSCO60682 206 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 PEX10O60683 326 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 FERP16591 822 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 CNGA1P29973 690 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 BMS1Q14692 1282 aaKnown RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 SLC9C1Q4G0N8 1177 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 PHLDB3Q6NSJ2 640 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 TXLNBQ8N3L3 684 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 LRRC57Q8N9N7 239 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 LRRN4CLQ8ND94 238 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 TMEM8AQ9HCN3 771 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 FAM207AQ9NSI2 230 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 SALL4Q9UJQ4 1053 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 RAB21Q9UL25 225 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF215Q9UL58 517 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 FRMD4BQ9Y2L6 1034 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 FAM155AB1AL88 458 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 PDHXO00330 501 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 CLIC2O15247 247 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 ADCY3O60266 1144 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 SNAI1O95863 264 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 SOX5P35711 763 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 SMTNP53814 917 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 PEX3P56589 373 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 DLG4P78352 724 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 IER5Q5VY09 327 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 RRAGAQ7L523 313 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 RASAL3Q86YV0 1011 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 FAM71AQ8IYT1 594 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 SLC35F6Q8N357 371 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 ZSWIM2Q8NEG5 633 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 HELQQ8TDG4 1101 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 CEP170P1Q96L14 293 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 FAM81BQ96LP2 452 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 IRX2Q9BZI1 471 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 TMEM117Q9H0C3 514 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 POLR3FQ9H1D9 316 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 FZD8Q9H461 694 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 GCNT4Q9P109 453 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 SLC15A5A6NIM6 579 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 SLC16A4O15374 487 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 KIF5CO60282 957 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 C4BPAP04003 597 aaKnown RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 LNX1Q8TBB1 728 aaPredicted RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 EEF2KMTQ96G04 330 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 GBA2Q9HCG7 927 aaPredicted RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 KMT5AQ9NQR1 393 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 TCEAL9Q9UHQ7 104 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 NOCTQ9UK39 431 aaKnown RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 TSC2P49815 1807 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 KRT86O43790 486 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 ACTN1P12814 892 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 TCF7P36402 384 aaPredicted RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 POLR2FP61218 127 aaKnown RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 APBA1Q02410 837 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 MCL1Q07820 350 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 CAPSQ13938 189 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 OLFML2BQ68BL8 750 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 GPD1LQ8N335 351 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 DDX1Q92499 740 aaKnown RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 SHC3Q92529 594 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 NAPGQ99747 312 aaPredicted RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 C16orf70Q9BSU1 422 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 ISCUQ9H1K1 167 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 MMRN2Q9H8L6 949 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 NRBP2Q9NSY0 501 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 Q9Y3F1 56 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 DENND3A2RUS2 1198 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 C22orf31O95567 290 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 GCNT1Q02742 428 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 PTK2Q05397 1052 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 LAMC2Q13753 1193 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 SNRNP35Q16560 246 aaKnown RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 AMHR2Q16671 573 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF484Q5JVG2 852 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 TSHZ1Q6ZSZ6 1077 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 ARMCX2Q7L311 632 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 SRGAP1Q7Z6B7 1085 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 NCAPG2Q86XI2 1143 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF516Q92618 1163 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 SLC10A4Q96EP9 437 aa7.81□□□□□ -1.16
NPHP1-201ENST00000316534 FAM124BQ9H5Z6 455 aaPredicted RBP7.81□□□□□ -1.16
NPHP1-201ENST00000316534 TISP43B9A030 160 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 STAT5BP51692 787 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 GNG11P61952 73 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 CCNA1P78396 465 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 ADAM17P78536 824 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 MYL7Q01449 175 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 ASIC2Q16515 512 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 LY6KQ17RY6 165 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 ENOSF1Q7L5Y1 443 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 TRIM58Q8NG06 486 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 SCFD2Q8WU76 684 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 HNRNPLLQ8WVV9 542 aaKnown RBP7.8□□□□□ -1.16
NPHP1-201ENST00000316534 TCP11Q8WWU5 503 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 CCDC42Q96M95 316 aa7.8□□□□□ -1.16
NPHP1-201ENST00000316534 CFHR5Q9BXR6 569 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms