RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 KIAA0753Q2KHM9 967 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 ANO4Q32M45 955 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 BCL6BQ8N143 479 aaPredicted RBP5.05□□□□□ -1.6
SMCO3-201ENST00000316048 C1GALT1C1Q96EU7 318 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 KCNK12Q9HB15 430 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 ARHGAP20Q9P2F6 1191 aa5.05□□□□□ -1.6
SMCO3-201ENST00000316048 FAM227AF5H4B4 570 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 TMEM127O75204 238 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 GSPT1P15170 499 aaKnown RBP5.04□□□□□ -1.6
SMCO3-201ENST00000316048 ATF2P15336 505 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 HTR1BP28222 390 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 YBX1P67809 324 aaKnown RBP5.04□□□□□ -1.6
SMCO3-201ENST00000316048 SAFB2Q14151 953 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMCO3-201ENST00000316048 SEPT2Q15019 361 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 FAM43AQ8N2R8 423 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 PLBD2Q8NHP8 589 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 FBXO41Q8TF61 875 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 EVI5LQ96CN4 794 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 BTBD2Q9BX70 525 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 FAM204AQ9H8W3 233 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 DNAI1Q9UI46 699 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 PCDHB1Q9Y5F3 818 aa5.04□□□□□ -1.6
SMCO3-201ENST00000316048 CREB3O43889 395 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 DTNBO60941 627 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 SEC24DO94855 1032 aaPredicted RBP5.03□□□□□ -1.6
SMCO3-201ENST00000316048 DSC2Q02487 901 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 ADAM9Q13443 819 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 MUM1L1Q5H9M0 696 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 ZNF605Q86T29 641 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 SMARCC2Q8TAQ2 1214 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 ELAC2Q9BQ52 826 aaKnown RBP5.03□□□□□ -1.6
SMCO3-201ENST00000316048 SLC6A17Q9H1V8 727 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 TMEM60Q9H2L4 133 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 RSAD1Q9HA92 442 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 DLL4Q9NR61 685 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 NR2E3Q9Y5X4 410 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 CCDC18Q5T9S5 1454 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 CLSPNQ9HAW4 1339 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 IFRD1O00458 451 aaPredicted RBP5.03□□□□□ -1.6
SMCO3-201ENST00000316048 PQBP1O60828 265 aaKnown RBP5.03□□□□□ -1.6
SMCO3-201ENST00000316048 AFMP43652 599 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 TRAPPC10P48553 1259 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 MAP2K6P52564 334 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 ITGA1P56199 1179 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 ZNF280AP59817 542 aaPredicted RBP5.03□□□□□ -1.6
SMCO3-201ENST00000316048 CD69Q07108 199 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 CACNB2Q08289 660 aaPredicted RBP5.03□□□□□ -1.6
SMCO3-201ENST00000316048 SEMA5AQ13591 1074 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 DHX8Q14562 1220 aaKnown RBP5.03□□□□□ -1.6
SMCO3-201ENST00000316048 NOMO1Q15155 1222 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 STILQ15468 1287 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 VPS72Q15906 364 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 BTNL9Q6UXG8 535 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 SRGAP1Q7Z6B7 1085 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 SRLQ86TD4 932 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 ZC3H18Q86VM9 953 aaKnown RBP5.03□□□□□ -1.6
SMCO3-201ENST00000316048 KIAA0319LQ8IZA0 1049 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 FATE1Q969F0 183 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 GORASP1Q9BQQ3 440 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 HAPLN2Q9GZV7 340 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 KLHL11Q9NVR0 708 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 KCMF1Q9P0J7 381 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 STAP2Q9UGK3 403 aa5.03□□□□□ -1.6
SMCO3-201ENST00000316048 CARMIL2Q6F5E8 1435 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMCO3-201ENST00000316048 HNRNPLP14866 589 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMCO3-201ENST00000316048 PEX2P28328 305 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 ALDH5A1P51649 535 aaPredicted RBP5.02□□□□□ -1.61
SMCO3-201ENST00000316048 CNN3Q15417 329 aaKnown RBP5.02□□□□□ -1.61
SMCO3-201ENST00000316048 FAM129CQ86XR2 697 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 GJA10Q969M2 543 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 DYDC2Q96IM9 177 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 HIST1H2AHQ96KK5 128 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 HIST1H2AJQ99878 128 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 ADI1Q9BV57 179 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 GREM2Q9H772 168 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 ARMT1Q9H993 441 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 KCND1Q9NSA2 647 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 PUF60Q9UHX1 559 aaKnown RBP5.02□□□□□ -1.61
SMCO3-201ENST00000316048 CDC42EP3Q9UKI2 254 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 L1RE1Q9UN81 338 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 HECW1Q76N89 1606 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 IGHA1P01876 353 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 FTLP02792 175 aaPredicted RBP5.02□□□□□ -1.61
SMCO3-201ENST00000316048 HTR3AP46098 478 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 NFATC3Q12968 1075 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 KLHDC10Q6PID8 442 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 ABHD15Q6UXT9 468 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 BMP8AQ7Z5Y6 402 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 RHOT1Q8IXI2 618 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 NOX5Q96PH1 765 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 TBCBQ99426 244 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 PPCSQ9HAB8 311 aa5.02□□□□□ -1.61
SMCO3-201ENST00000316048 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.01□□□□□ -1.61
SMCO3-201ENST00000316048 HRGP04196 525 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 CYP2C8P10632 490 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 SLC6A9P48067 706 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 STAT5BP51692 787 aa5.01□□□□□ -1.61
SMCO3-201ENST00000316048 AGFG1P52594 562 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms