RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 KRT35Q92764 455 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 XPO6Q96QU8 1125 aaKnown RBP16.07■□□□□ 0.16
TFE3-201ENST00000315869 OSBPL7Q9BZF2 842 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 SEMA4AQ9H3S1 761 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ZNF70Q9UC06 446 aaPredicted RBP16.07■□□□□ 0.16
TFE3-201ENST00000315869 SERPINA10Q9UK55 444 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 DBR1Q9UK59 544 aaKnown RBP16.07■□□□□ 0.16
TFE3-201ENST00000315869 MYH4Q9Y623 1939 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 GOLGA8IPA6NC78 632 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 GOLGA8JA6NMD2 632 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 PRKG1Q13976 671 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.06■□□□□ 0.16
TFE3-201ENST00000315869 CCDC127Q96BQ5 260 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 CHMP6Q96FZ7 201 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 FAM20AQ96MK3 541 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 DNM1LO00429 736 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 CHUKO15111 745 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 ACSL3O95573 720 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 SSR1P43307 286 aaKnown RBP16.06■□□□□ 0.16
TFE3-201ENST00000315869 SNCBQ16143 134 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 AGBL2Q5U5Z8 902 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 FBXO28Q9NVF7 368 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 CCDC169A6NNP5 214 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 FOSP01100 380 aaPredicted RBP16.06■□□□□ 0.16
TFE3-201ENST00000315869 BMP3P12645 472 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 GJC1P36383 396 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 FOXR2Q6PJQ5 311 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 HES6Q96HZ4 224 aa16.06■□□□□ 0.16
TFE3-201ENST00000315869 COL4A5P29400 1685 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 FRMD3A2A2Y4 597 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 OPLAHO14841 1288 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 RPSAP08865 295 aaKnown RBP16.05■□□□□ 0.16
TFE3-201ENST00000315869 TMEM253P0C7T8 217 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 BCRP11274 1271 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 NF2P35240 595 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 MAP2K1Q02750 393 aaPredicted RBP16.05■□□□□ 0.16
TFE3-201ENST00000315869 SPIRE1Q08AE8 756 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 EPS8L3Q8TE67 593 aaKnown RBP16.05■□□□□ 0.16
TFE3-201ENST00000315869 APEX2Q9UBZ4 518 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 GAP43P17677 238 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 DLK2Q6UY11 383 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 RPUSD2Q8IZ73 545 aaKnown RBP16.05■□□□□ 0.16
TFE3-201ENST00000315869 PRMT1Q99873 361 aaKnown RBP16.05■□□□□ 0.16
TFE3-201ENST00000315869 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 ASIC3Q9UHC3 531 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 TCEAL9Q9UHQ7 104 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
TFE3-201ENST00000315869 CES2O00748 559 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 SLC16A3O15427 465 aaKnown RBP16.04■□□□□ 0.16
TFE3-201ENST00000315869 CALCOCO2Q13137 446 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 ZKSCAN8Q15776 578 aaPredicted RBP16.04■□□□□ 0.16
TFE3-201ENST00000315869 DCAF12L1Q5VU92 463 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 CCDC137Q6PK04 289 aaKnown RBP16.04■□□□□ 0.16
TFE3-201ENST00000315869 TBC1D1Q86TI0 1168 aaPredicted RBP16.04■□□□□ 0.16
TFE3-201ENST00000315869 IDI2Q9BXS1 227 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 SMCHD1A6NHR9 2005 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 BTNL10A8MVZ5 291 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 SCTRP47872 440 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 SMTNP53814 917 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 DCAF4Q8WV16 495 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 KAT5Q92993 513 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 ACTR5Q9H9F9 607 aaPredicted RBP16.04■□□□□ 0.16
TFE3-201ENST00000315869 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 PIM2Q9P1W9 311 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 NRXN2Q9P2S2 1712 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 HMGB2P26583 209 aaKnown RBP16.04■□□□□ 0.16
TFE3-201ENST00000315869 PTENP60484 403 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 CYB5D1Q6P9G0 228 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 PARP9Q8IXQ6 854 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 AGPAT1Q99943 283 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 PAIP2Q9BPZ3 127 aaKnown RBP16.04■□□□□ 0.16
TFE3-201ENST00000315869 MYH7BA7E2Y1 1941 aa16.04■□□□□ 0.16
TFE3-201ENST00000315869 MYO3BQ8WXR4 1341 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 ANKRD62A6NC57 917 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 RASGRF2O14827 1237 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 EIF3BP55884 814 aaKnown RBP16.03■□□□□ 0.16
TFE3-201ENST00000315869 JAM2P57087 298 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 ANKRD20A8PQ5CZ79 823 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 PAXIP1Q6ZW49 1069 aaPredicted RBP16.03■□□□□ 0.16
TFE3-201ENST00000315869 EPM2AIP1Q7L775 607 aaPredicted RBP16.03■□□□□ 0.16
TFE3-201ENST00000315869 CPNE8Q86YQ8 564 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 LRRC34Q8IZ02 419 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 SUPT20HQ8NEM7 779 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 COG5Q9UP83 839 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 COMTP21964 271 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 DLG4P78352 724 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 MAPK7Q13164 816 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 PHLDB3Q6NSJ2 640 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 ZNF577Q9BSK1 485 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 CARD9Q9H257 536 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 TBK1Q9UHD2 729 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 MTUS1Q9ULD2 1270 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 STXBP5LQ9Y2K9 1186 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 EZRP15311 586 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms