RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 APEX2Q9UBZ4 518 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 CYP26A1O43174 497 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 NDUFB10O96000 172 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 RSPH3Q86UC2 560 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 GPD1LQ8N335 351 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 SYT2Q8N9I0 419 aaPredicted RBP14.7□□□□□ -0.06
SPAST-201ENST00000315285 LRGUKQ96M69 825 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 POLR3FQ9H1D9 316 aaPredicted RBP14.7□□□□□ -0.06
SPAST-201ENST00000315285 ZNF302Q9NR11 478 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 ASNSD1Q9NWL6 643 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 IP6K2Q9UHH9 426 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 MAP2P11137 1827 aaKnown RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 STX1BP61266 288 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 TMPRSS15P98073 1019 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 SPOUT1Q5T280 376 aaKnown RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 TRIM72Q6ZMU5 477 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 METTL23Q86XA0 190 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 SH2D3CQ8N5H7 860 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 PSPC1Q8WXF1 523 aaKnown RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 ERGIC2Q96RQ1 377 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 AP5M1Q9H0R1 490 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 NOP53Q9NZM5 478 aaKnown RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 AGLP35573 1532 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 ITSN1Q15811 1721 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 SKIP12755 728 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 FMO5P49326 533 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 WRNIP1Q96S55 665 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 HPCAL4Q9UM19 191 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 FHOD1Q9Y613 1164 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 RTN2O75298 545 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 KLHL38Q2WGJ6 581 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 SPOPLQ6IQ16 392 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 SLC35G2Q8TBE7 412 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 RIN2Q8WYP3 895 aaPredicted RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 NYAP2Q9P242 653 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 PCDHA10Q9Y5I2 948 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 DIP2BQ9P265 1576 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 KRT14P02533 472 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 RXRBP28702 533 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 IREB2P48200 963 aaKnown RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.06
SPAST-201ENST00000315285 KPNA2P52292 529 aaKnown RBP14.69□□□□□ -0.06
SPAST-201ENST00000315285 GPS1Q13098 491 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 NAB2Q15742 525 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 PRR5LQ6MZQ0 368 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 CRLF3Q8IUI8 442 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 SMARCAL1Q9NZC9 954 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 MID2Q9UJV3 735 aa14.69□□□□□ -0.06
SPAST-201ENST00000315285 TTI1O43156 1089 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 SLC26A4O43511 780 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 KRT38O76015 456 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 SMARCA1P28370 1054 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 TOB1P50616 345 aaPredicted RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 THOC5Q13769 683 aaKnown RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 LRRC14Q15048 493 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 BBS5Q8N3I7 341 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 CRAMP1Q96RY5 1269 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 RBAKQ9NYW8 714 aaPredicted RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 EPS15L1Q9UBC2 864 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 TPX2Q9ULW0 747 aaKnown RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 SPDYE16A6NNV3 312 aaPredicted RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 ZWINTO95229 277 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 SLC9A1P19634 815 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 SPDYE2Q495Y8 402 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 ICE2Q659A1 982 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 ZNF710Q8N1W2 664 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 N4BP2L2Q92802 583 aaPredicted RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 NCAPGQ9BPX3 1015 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 PCSK1NQ9UHG2 260 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 HEY1Q9Y5J3 304 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 SMIM24O75264 130 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 MYBP10242 640 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 KRT3P12035 628 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 CD44P16070 742 aaKnown RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 NCF2P19878 526 aaPredicted RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 ITPK1Q13572 414 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 KIAA1755Q5JYT7 1200 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 AGXT2Q9BYV1 514 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 ESYT2A0FGR8 921 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 KRT7P08729 469 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 YWHABP31946 246 aaKnown RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 GPC3P51654 580 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 KRT17Q04695 432 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 IZUMO3Q5VZ72 239 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 CATSPER4Q7RTX7 472 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 RAB44Q7Z6P3 723 aaPredicted RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 TGS1Q96RS0 853 aaKnown RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 FAM49AQ9H0Q0 323 aaPredicted RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 JMJD4Q9H9V9 463 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 AGO2Q9UKV8 859 aaKnown RBP14.68□□□□□ -0.06
SPAST-201ENST00000315285 INTUQ9ULD6 942 aa14.68□□□□□ -0.06
SPAST-201ENST00000315285 MAP3K7O43318 606 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 ATP5HO75947 161 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 MDH1P40925 334 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 PSMC1P62191 440 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 HP1BP3Q5SSJ5 553 aaPredicted RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 LINC00116Q8NCU8 138 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 TRIM56Q9BRZ2 755 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms