RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 PSEN2P49810 448 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 PPFIA1Q13136 1202 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 HIC1Q14526 733 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 MTFR1Q15390 333 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 MCPH1Q8NEM0 835 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 SPC25Q9HBM1 224 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 ZNHIT6Q9NWK9 470 aaKnown RBP27.23■■□□□ 1.95
CDPF1-201ENST00000314567 CGNQ9P2M7 1197 aaKnown RBP27.23■■□□□ 1.95
CDPF1-201ENST00000314567 GJB1P08034 283 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 RFC5P40937 340 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 KCNA10Q16322 511 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 LHX8Q68G74 356 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 ASAP3Q8TDY4 903 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 KIFAP3Q92845 792 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 C17orf75Q9HAS0 396 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 ADGRG1Q9Y653 693 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 TRIP12Q14669 1992 aaPredicted RBP27.22■■□□□ 1.95
CDPF1-201ENST00000314567 FRMPD3Q5JV73 1810 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 SMIM10L2AP0DMW4 78 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 SMIM10L2BP0DMW5 78 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 MTF1Q14872 753 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 GRIK4Q16099 956 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 SLC9C1Q4G0N8 1177 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 MARCH8Q5T0T0 291 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 SLC9A9Q8IVB4 645 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 TMEM174Q8WUU8 243 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 MMRN2Q9H8L6 949 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 AGPAT5Q9NUQ2 364 aa27.22■■□□□ 1.95
CDPF1-201ENST00000314567 AKAP3O75969 853 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 C22orf31O95567 290 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 KLRC1P26715 233 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 CLCN3P51790 818 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 NCKAP1LP55160 1127 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 SNRPFP62306 86 aaKnown RBP27.21■■□□□ 1.95
CDPF1-201ENST00000314567 METTL13Q8N6R0 699 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 KLHDC9Q8NEP7 349 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 NEK11Q8NG66 645 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 HVCN1Q96D96 273 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 ACCSQ96QU6 501 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 AGPAT3Q9NRZ7 376 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 HAS3O00219 553 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 CLIC2O15247 247 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 SLC16A4O15374 487 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 ASGR1P07306 291 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 PSMC2P35998 433 aaKnown RBP27.21■■□□□ 1.95
CDPF1-201ENST00000314567 CDK17Q00537 523 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 ZNF484Q5JVG2 852 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 SYCP3Q8IZU3 236 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 KIF18AQ8NI77 898 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 ZNF668Q96K58 619 aaPredicted RBP27.21■■□□□ 1.95
CDPF1-201ENST00000314567 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.21■■□□□ 1.95
CDPF1-201ENST00000314567 DMAC2Q9NW81 257 aa27.21■■□□□ 1.95
CDPF1-201ENST00000314567 ADGRA3Q8IWK6 1321 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 CCDC169A6NNP5 214 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 AFPP02771 609 aaKnown RBP27.2■■□□□ 1.94
CDPF1-201ENST00000314567 GLRA2P23416 452 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 HNRNPH3P31942 346 aaKnown RBP27.2■■□□□ 1.94
CDPF1-201ENST00000314567 NPTX2P47972 431 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 ZNF200P98182 395 aaPredicted RBP27.2■■□□□ 1.94
CDPF1-201ENST00000314567 GTF2BQ00403 316 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 KCNMA1Q12791 1236 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 KCNH2Q12809 1159 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 CCSAPQ6IQ19 270 aaPredicted RBP27.2■■□□□ 1.94
CDPF1-201ENST00000314567 EFCAB12Q6NXP0 572 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 LMBR1Q8WVP7 490 aa27.2■■□□□ 1.94
CDPF1-201ENST00000314567 FAM207AQ9NSI2 230 aaPredicted RBP27.2■■□□□ 1.94
CDPF1-201ENST00000314567 IGKV6-21A0A0C4DH24 114 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 ARL2P36404 184 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 RTP1P59025 263 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 NKX3-2P78367 333 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 DESI2Q9BSY9 194 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 SCN10AQ9Y5Y9 1956 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 SMTNP53814 917 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 ETF1P62495 437 aaKnown RBP27.19■■□□□ 1.94
CDPF1-201ENST00000314567 WDR59Q6PJI9 974 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 MTHFD1LQ6UB35 978 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 C12orf56Q8IXR9 622 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 MYRIPQ8NFW9 859 aa27.19■■□□□ 1.94
CDPF1-201ENST00000314567 PRPF31Q8WWY3 499 aaKnown RBP27.19■■□□□ 1.94
CDPF1-201ENST00000314567 DMP1Q13316 513 aaPredicted RBP27.18■■□□□ 1.94
CDPF1-201ENST00000314567 HAUS6Q7Z4H7 955 aa27.18■■□□□ 1.94
CDPF1-201ENST00000314567 FAM186BQ8IYM0 893 aa27.18■■□□□ 1.94
CDPF1-201ENST00000314567 SPIRE2Q8WWL2 714 aa27.18■■□□□ 1.94
CDPF1-201ENST00000314567 PPP1R16BQ96T49 567 aa27.18■■□□□ 1.94
CDPF1-201ENST00000314567 MTG1Q9BT17 334 aaPredicted RBP27.18■■□□□ 1.94
CDPF1-201ENST00000314567 NUCKS1Q9H1E3 243 aaKnown RBP27.18■■□□□ 1.94
CDPF1-201ENST00000314567 CEP72Q9P209 647 aa27.18■■□□□ 1.94
CDPF1-201ENST00000314567 HDAC6Q9UBN7 1215 aa27.18■■□□□ 1.94
CDPF1-201ENST00000314567 PHLPP2Q6ZVD8 1323 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 CASP4P49662 377 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 CTU1Q7Z7A3 348 aaKnown RBP27.17■■□□□ 1.94
CDPF1-201ENST00000314567 ZNF592Q92610 1267 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 BORCS6Q96GS4 357 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 PLAGL2Q9UPG8 496 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 FRMD4BQ9Y2L6 1034 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 ABCD1P33897 745 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 CCDC170Q8IYT3 715 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 CHP1Q99653 195 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 KMT5AQ9NQR1 393 aa27.17■■□□□ 1.94
CDPF1-201ENST00000314567 SUCLA2Q9P2R7 463 aaPredicted RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms