RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TAS2R14Q9NYV8 317 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 APEX2Q9UBZ4 518 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 L1RE1Q9UN81 338 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 UBE4BO95155 1302 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 POTEB2H3BUK9 544 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 ATP4AP20648 1035 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 SMTNP53814 917 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 IRX3P78415 501 aaPredicted RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 STXBP2Q15833 593 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 GNPTABQ3T906 1256 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 MSANTD4Q8NCY6 345 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 BICD1Q96G01 975 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 TXNRD2Q9NNW7 524 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 CYP26B1Q9NR63 512 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 WDR81Q562E7 1941 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 GRID2IPA4D2P6 1211 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 SPATA31C2B4DYI2 1134 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 CALCAP01258 141 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 SOX5P35711 763 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 SNRNP35Q16560 246 aaKnown RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 NOL9Q5SY16 702 aaKnown RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 SLC39A4Q6P5W5 647 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 ABHD15Q6UXT9 468 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 LBX2Q6XYB7 198 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 OTUD6AQ7L8S5 288 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 SLC20A1Q8WUM9 679 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 POMGNT1Q8WZA1 660 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 ZNF668Q96K58 619 aaPredicted RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 ANKEF1Q9NU02 776 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 MYH9P35579 1960 aaKnown RBP13.47□□□□□ -0.25
RNF4-201ENST00000314289 MARK3P27448 753 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 NCKAP1LP55160 1127 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 LY6KQ17RY6 165 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 TMEM63BQ5T3F8 832 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 PROCA1Q8NCQ7 364 aaPredicted RBP13.47□□□□□ -0.25
RNF4-201ENST00000314289 LMO3Q8TAP4 145 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 HNRNPLLQ8WVV9 542 aaKnown RBP13.47□□□□□ -0.25
RNF4-201ENST00000314289 LRRC1Q9BTT6 524 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 POLR3FQ9H1D9 316 aaPredicted RBP13.47□□□□□ -0.25
RNF4-201ENST00000314289 OSGEPQ9NPF4 335 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 RAB21Q9UL25 225 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 PPP2R3BQ9Y5P8 575 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 GTPBP10A4D1E9 387 aaKnown RBP13.47□□□□□ -0.25
RNF4-201ENST00000314289 MYBL2P10244 700 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 PPP2R5AQ15172 486 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 NFIL3Q16649 462 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 Q3C1V9 767 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 INTS8Q75QN2 995 aaKnown RBP13.47□□□□□ -0.25
RNF4-201ENST00000314289 SYT17Q9BSW7 474 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 STK33Q9BYT3 514 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 SPATC1LQ9H0A9 340 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 TMEM117Q9H0C3 514 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 ZNF408Q9H9D4 720 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 LUC7LQ9NQ29 371 aaKnown RBP13.47□□□□□ -0.25
RNF4-201ENST00000314289 SBF1O95248 1867 aa13.47□□□□□ -0.25
RNF4-201ENST00000314289 SOWAHBA6NEL2 793 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 ATP2A1O14983 1001 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 IVLP07476 585 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 ALDH5A1P51649 535 aaPredicted RBP13.46□□□□□ -0.25
RNF4-201ENST00000314289 POLGP54098 1239 aaPredicted RBP13.46□□□□□ -0.25
RNF4-201ENST00000314289 TRIM50Q86XT4 487 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 SLC9A9Q8IVB4 645 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 PPM1KQ8N3J5 372 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 SAMD3Q8N6K7 520 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 SPATA4Q8NEY3 305 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 SEMA4DQ92854 862 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 FAM213AQ9BRX8 229 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 PI4K2AQ9BTU6 479 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 ASCC2Q9H1I8 757 aaPredicted RBP13.46□□□□□ -0.25
RNF4-201ENST00000314289 PNMA2Q9UL42 364 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 BRCA2P51587 3418 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 CKAP4Q07065 602 aaKnown RBP13.46□□□□□ -0.25
RNF4-201ENST00000314289 SEZ6Q53EL9 994 aa13.46□□□□□ -0.25
RNF4-201ENST00000314289 RBM12Q9NTZ6 932 aaKnown RBP13.46□□□□□ -0.25
RNF4-201ENST00000314289 DMGDHQ9UI17 866 aaKnown RBP13.46□□□□□ -0.25
RNF4-201ENST00000314289 LCTP09848 1927 aa13.46□□□□□ -0.26
RNF4-201ENST00000314289 LRRIQ3A6PVS8 624 aaPredicted RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 MAFGO15525 162 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 SUPT20HL2P0C7V6 817 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 UBA1P22314 1058 aaKnown RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 MXI1P50539 228 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 GALCP54803 685 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 SH3D19Q5HYK7 790 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 XRRA1Q6P2D8 792 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 ZBTB10Q96DT7 871 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 FAM204AQ9H8W3 233 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 ZNF302Q9NR11 478 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 IGSF9BQ9UPX0 1349 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 LOXHD1Q8IVV2 1947 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 LRRIQ4A6NIV6 560 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 CLSTN1O94985 981 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 HARSP12081 509 aaKnown RBP13.45□□□□□ -0.26
RNF4-201ENST00000314289 FERP16591 822 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 PRKCIP41743 596 aa13.45□□□□□ -0.26
RNF4-201ENST00000314289 DRP2Q13474 957 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms