RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CCDC184Q52MB2 194 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 GNASQ5JWF2 1037 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 KHDRBS2Q5VWX1 349 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 HEATR6Q6AI08 1181 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 JADE1Q6IE81 842 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ANKS3Q6ZW76 656 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 FRMD5Q7Z6J6 570 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TMCO5AQ8N6Q1 288 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 VPS37AQ8NEZ2 397 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 OR6J1Q8NGC5 347 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 FBXO41Q8TF61 875 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 MAGOHBQ96A72 148 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TTC17Q96AE7 1141 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CEP95Q96GE4 821 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 HEXIM2Q96MH2 286 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ZBTB18Q99592 522 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 NYAP2Q9P242 653 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SLC9A2Q9UBY0 812 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 IP6K2Q9UHH9 426 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 LTN1O94822 1766 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 USP42Q9H9J4 1324 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 UNCXA6NJT0 531 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ZBBXA8MT70 800 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 M0R3G1 203 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SNX2O60749 519 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 HNRNPCL1O60812 293 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SPAG6O75602 509 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 C6orf222P0C671 652 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 AARSP49588 968 aaKnown RBP eCLIP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 HUNKP57058 714 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 POLR2FP61218 127 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ESRRGP62508 458 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RABL6Q3YEC7 729 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 EFL1Q7Z2Z2 1120 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 OOSP2Q86WS3 158 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SPATA2LQ8IUW3 424 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC13Q8IYE1 715 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 DTX3LQ8TDB6 740 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF653Q96CK0 615 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 OXCT2Q9BYC2 517 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 NLRC4Q9NPP4 1024 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 POLIQ9UNA4 740 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PCDHB12Q9Y5F1 795 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TARSL2A2RTX5 802 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SH2B2O14492 632 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 MYL3P08590 195 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CPB1P15086 417 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PFKFB1P16118 471 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PEX3P56589 373 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ARHGEF7Q14155 803 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 KCNB1Q14721 858 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SGSM1Q2NKQ1 1148 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ANKRD20A4Q4UJ75 823 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ANKRD20A8PQ5CZ79 823 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ANKRD20A2Q5SQ80 823 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 C6orf118Q5T5N4 469 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ANKRD20A1Q5TYW2 823 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TMTC3Q6ZXV5 915 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RIN2Q8WYP3 895 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ALKBH8Q96BT7 664 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 FTHL17Q9BXU8 183 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CALN1Q9BXU9 219 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SELENONQ9NZV5 590 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 DOLKQ9UPQ8 538 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ATF5Q9Y2D1 282 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 EMSYQ7Z589 1322 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CCL15-CCL14A0A0B4J2E2 113 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC78A2IDD5 438 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 NCAM2O15394 837 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RWDD2BP57060 319 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RASGRF1Q13972 1273 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 POLD3Q15054 466 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CCL15Q16663 113 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TTLL9Q3SXZ7 439 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 FSCBQ5H9T9 825 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CYP4A22Q5TCH4 519 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SUSD4Q5VX71 490 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SEPT1Q8WYJ6 367 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 DCUN1D1Q96GG9 259 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ASPSCR1Q9BZE9 553 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PSD3Q9NYI0 1048 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RBAKQ9NYW8 714 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 KLHL8Q9P2G9 620 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 UXTQ9UBK9 157 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TMX2Q9Y320 296 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 VWDEQ8N2E2 1590 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PDXKO00764 312 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ECEL1O95672 775 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TXNP10599 105 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 YWHABP31946 246 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RNASE9P60153 205 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PPP4CP60510 307 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 AP1B1Q10567 949 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RCN2Q14257 317 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 KNOP1Q1ED39 458 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 LONRF3Q496Y0 759 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 STAMQ92783 540 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TSPAN17Q96FV3 270 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 OTUD5Q96G74 571 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms