RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 COG5Q9UP83 839 aa21.41■■□□□ 1.02
LRFN4-201ENST00000309602 ANKRD62A6NC57 917 aa21.41■■□□□ 1.02
LRFN4-201ENST00000309602 BHMG1C9JSJ3 638 aaPredicted RBP21.41■■□□□ 1.02
LRFN4-201ENST00000309602 CCDC188H7C350 402 aa21.41■■□□□ 1.02
LRFN4-201ENST00000309602 VWA5AO00534 786 aa21.41■■□□□ 1.02
LRFN4-201ENST00000309602 IVLP07476 585 aa21.41■■□□□ 1.02
LRFN4-201ENST00000309602 KCTD19Q17RG1 926 aaPredicted RBP21.41■■□□□ 1.02
LRFN4-201ENST00000309602 TMEM117Q9H0C3 514 aa21.41■■□□□ 1.02
LRFN4-201ENST00000309602 GINM1Q9NU53 330 aa21.41■■□□□ 1.02
LRFN4-201ENST00000309602 SHOX2O60902 331 aaPredicted RBP21.4■■□□□ 1.02
LRFN4-201ENST00000309602 CLSTN1O94985 981 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 KRT14P02533 472 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 KRT76Q01546 638 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 DCAF12L1Q5VU92 463 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 KIFC3Q9BVG8 833 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 TCEAL9Q9UHQ7 104 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 ZNF233A6NK53 670 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 ANKRD63C9JTQ0 380 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 MAPK13O15264 365 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 SFNP31947 248 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 MXI1P50539 228 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 BAATQ14032 418 aaPredicted RBP21.4■■□□□ 1.02
LRFN4-201ENST00000309602 SAMD7Q7Z3H4 446 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 DDX42Q86XP3 938 aaKnown RBP eCLIP21.4■■□□□ 1.02
LRFN4-201ENST00000309602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.4■■□□□ 1.023e-10■■■■■ 130.4
LRFN4-201ENST00000309602 ANKEF1Q9NU02 776 aa21.4■■□□□ 1.02
LRFN4-201ENST00000309602 ADSSP30520 456 aa21.39■■□□□ 1.02
LRFN4-201ENST00000309602 HLTFQ14527 1009 aaKnown RBP eCLIP21.39■■□□□ 1.02
LRFN4-201ENST00000309602 ANO5Q75V66 913 aa21.39■■□□□ 1.02
LRFN4-201ENST00000309602 CBWD2Q8IUF1 395 aa21.39■■□□□ 1.02
LRFN4-201ENST00000309602 TMEM161BQ8NDZ6 487 aa21.39■■□□□ 1.02
LRFN4-201ENST00000309602 RNF146Q9NTX7 359 aa21.39■■□□□ 1.02
LRFN4-201ENST00000309602 AMACRQ9UHK6 382 aa21.39■■□□□ 1.02
LRFN4-201ENST00000309602 CCDC169A6NNP5 214 aa21.39■■□□□ 1.01
LRFN4-201ENST00000309602 SNRPFP62306 86 aaKnown RBP21.39■■□□□ 1.01
LRFN4-201ENST00000309602 NBPF12Q5TAG4 269 aaPredicted RBP21.39■■□□□ 1.01
LRFN4-201ENST00000309602 RPUSD2Q8IZ73 545 aaKnown RBP21.39■■□□□ 1.01
LRFN4-201ENST00000309602 EIF1ADQ8N9N8 165 aaKnown RBP21.39■■□□□ 1.01
LRFN4-201ENST00000309602 IWS1Q96ST2 819 aa21.39■■□□□ 1.01
LRFN4-201ENST00000309602 TTC7AQ9ULT0 858 aaPredicted RBP21.39■■□□□ 1.01
LRFN4-201ENST00000309602 FGGP02679 453 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 HSPA9P38646 679 aaKnown RBP21.38■■□□□ 1.01
LRFN4-201ENST00000309602 NPTX2P47972 431 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 CUL1Q13616 776 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 VTI1AQ96AJ9 217 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 TBX20Q9UMR3 447 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 FTLP02792 175 aaPredicted RBP21.38■■□□□ 1.01
LRFN4-201ENST00000309602 USP8P40818 1118 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.38■■□□□ 1.01
LRFN4-201ENST00000309602 SAAL1Q96ER3 474 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 NEUROG2Q9H2A3 272 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 SLITRK6Q9H5Y7 841 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 HACL1Q9UJ83 578 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 NR2E1Q9Y466 385 aa21.38■■□□□ 1.01
LRFN4-201ENST00000309602 NFKBIEO00221 500 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 TULP1O00294 542 aaPredicted RBP21.37■■□□□ 1.01
LRFN4-201ENST00000309602 SGPL1O95470 568 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 SOX10P56693 466 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 MAP2K1Q02750 393 aaPredicted RBP21.37■■□□□ 1.01
LRFN4-201ENST00000309602 SNRNP35Q16560 246 aaKnown RBP21.37■■□□□ 1.01
LRFN4-201ENST00000309602 ZNF746Q6NUN9 644 aaPredicted RBP21.37■■□□□ 1.01
LRFN4-201ENST00000309602 MICALL2Q8IY33 904 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 BBXQ8WY36 941 aaPredicted RBP21.37■■□□□ 1.01
LRFN4-201ENST00000309602 BSNDQ8WZ55 320 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 SEMA4DQ92854 862 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 KREMEN1Q96MU8 473 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 MOV10L1Q9BXT6 1211 aaKnown RBP21.37■■□□□ 1.01
LRFN4-201ENST00000309602 PMM2O15305 246 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 NAA35Q5VZE5 725 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 VSIG10LQ86VR7 867 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 MAP4K3Q8IVH8 894 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 SH2D3CQ8N5H7 860 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 PCDHB18PQ96TA0 734 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 PNMA2Q9UL42 364 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 USP20Q9Y2K6 914 aa21.37■■□□□ 1.01
LRFN4-201ENST00000309602 PARP14Q460N5 1801 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 TTI1O43156 1089 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 ZBTB7AO95365 584 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 NR3C2P08235 984 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 CNGA1P29973 690 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 CCND2P30279 289 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 DALRD3Q5D0E6 543 aaKnown RBP21.36■■□□□ 1.01
LRFN4-201ENST00000309602 DNAJC21Q5F1R6 531 aaKnown RBP21.36■■□□□ 1.01
LRFN4-201ENST00000309602 KCTD16Q68DU8 428 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 NLRX1Q86UT6 975 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 CD302Q8IX05 232 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 RHOT2Q8IXI1 618 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 SLC17A8Q8NDX2 589 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 CCDC127Q96BQ5 260 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 CELF4Q9BZC1 486 aaKnown RBP21.36■■□□□ 1.01
LRFN4-201ENST00000309602 EXOC7Q9UPT5 735 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 PCDHA10Q9Y5I2 948 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 DENND3A2RUS2 1198 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 ZNF862O60290 1169 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 FDX1P10109 184 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 CHRNB2P17787 502 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 RPS12P25398 132 aaKnown RBP21.36■■□□□ 1.01
LRFN4-201ENST00000309602 GMPSP49915 693 aaPredicted RBP21.36■■□□□ 1.01
LRFN4-201ENST00000309602 IRAK1P51617 712 aa21.36■■□□□ 1.01
LRFN4-201ENST00000309602 SMTNP53814 917 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms