RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 MYO6Q9UM54 1294 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 EMSYQ7Z589 1322 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 LRRIQ4A6NIV6 560 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 LRRN2O75325 713 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 SERPING1P05155 500 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 ZSCAN20P17040 1043 aaPredicted RBP24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 GCLMP48507 274 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 MYL7Q01449 175 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 ASTE1Q2TB18 679 aaPredicted RBP24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 IQCEQ6IPM2 695 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 GPR161Q8N6U8 529 aaKnown RBP24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 RABGGTAQ92696 567 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 HVCN1Q96D96 273 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 MORF4L1Q9UBU8 362 aa24.44■■□□□ 1.5
PDLIM2-202ENST00000308354 ATP1A1P05023 1023 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 CBX1P83916 185 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 TTLL4Q14679 1199 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 ASIC2Q16515 512 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 SNRNP35Q16560 246 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 C1orf220Q5T0J3 134 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 POMGNT1Q8WZA1 660 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 AIPL1Q9NZN9 384 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 ITGBL1O95965 494 aaPredicted RBP24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 ARL2P36404 184 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 KLHL30Q0D2K2 578 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 GPR142Q7Z601 462 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 SCFD2Q8WU76 684 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 TMEM174Q8WUU8 243 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 CCDC127Q96BQ5 260 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 PARK7Q99497 189 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 TSGA10Q9BZW7 698 aa24.43■■□□□ 1.5
PDLIM2-202ENST00000308354 SNRPFP62306 86 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 MAPK8IP2Q13387 824 aaPredicted RBP24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 WHAMMP3Q1A5X7 153 aa24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 TRAPPC11Q7Z392 1133 aa24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 INTS2Q9H0H0 1204 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 SUGCTQ9HAC7 445 aa24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 IRF2BP2Q7Z5L9 587 aa24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 SECISBP2LQ93073 1101 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 POP1Q99575 1024 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 ARGLU1Q9NWB6 273 aaPredicted RBP24.42■■□□□ 1.5
PDLIM2-202ENST00000308354 SSU72P8A0A1W2PR75 194 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 TAPT1Q6NXT6 567 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 DPP9Q86TI2 863 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 DEPTORQ8TB45 409 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 TRAPPC12Q8WVT3 735 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 ZBTB10Q96DT7 871 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 LGR5O75473 907 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 RFC5P40937 340 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 ADAMTS1Q9UHI8 967 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 CPA4Q9UI42 421 aa24.41■■□□□ 1.5
PDLIM2-202ENST00000308354 PLXNB2O15031 1838 aa24.4■■□□□ 1.5
PDLIM2-202ENST00000308354 STRNO43815 780 aa24.4■■□□□ 1.5
PDLIM2-202ENST00000308354 MAFO75444 373 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-202ENST00000308354 PTK2Q05397 1052 aa24.4■■□□□ 1.5
PDLIM2-202ENST00000308354 PLCB4Q15147 1175 aa24.4■■□□□ 1.5
PDLIM2-202ENST00000308354 BRDTQ58F21 947 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-202ENST00000308354 LRRC71Q8N4P6 559 aa24.4■■□□□ 1.5
PDLIM2-202ENST00000308354 BBXQ8WY36 941 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-202ENST00000308354 ZBTB42B2RXF5 422 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 ADCYAP1R1P41586 468 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 MAGEA1P43355 309 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 NAMPTP43490 491 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 JAM2P57087 298 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 PRPF31Q8WWY3 499 aaKnown RBP24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 PARD6BQ9BYG5 372 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 OGFRQ9NZT2 677 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 FBXL5Q9UKA1 691 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 DNAJC12Q9UKB3 198 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 CAPN6Q9Y6Q1 641 aa24.39■■□□□ 1.5
PDLIM2-202ENST00000308354 A0A087X0T9 212 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 SRGAP2O75044 1071 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 FAM228BP0C875 321 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 LIG4P49917 911 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 ZNF157P51786 506 aaPredicted RBP24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 ARHGAP1Q07960 439 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 CAPSQ13938 189 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 PAPD7Q5XG87 772 aaKnown RBP24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 LMO3Q8TAP4 145 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 ATP8B4Q8TF62 1192 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 FAM167AQ96KS9 214 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 FAM213AQ9BRX8 229 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 TRPC6Q9Y210 931 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 DIS3Q9Y2L1 958 aaKnown RBP24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 SAR1BQ9Y6B6 198 aa24.39■■□□□ 1.49
PDLIM2-202ENST00000308354 CTAGE15A4D2H0 777 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 K7ERI5 159 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 SNAI1O95863 264 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 EDN1P05305 212 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 CTAGE8P0CG41 777 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 STRN3Q13033 797 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 FAM110CQ1W6H9 321 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 PHLDB3Q6NSJ2 640 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 PLPPR4Q7Z2D5 763 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 CTAGE6Q86UF2 777 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 CTAGE4Q8IX94 777 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 ZBTB45Q96K62 511 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms