RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CHEK2O96017 543 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 CDC27P30260 824 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 CDC25CP30307 473 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 MORF4L2Q15014 288 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 CCDC137Q6PK04 289 aaKnown RBP13.43□□□□□ -0.26
USP38-201ENST00000307017 CELF4Q9BZC1 486 aaKnown RBP13.43□□□□□ -0.26
USP38-201ENST00000307017 WDR17Q8IZU2 1322 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 AIM2O14862 343 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 SERPINI2O75830 405 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 CDK8P49336 464 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 ARSEP51690 589 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 PLOD1Q02809 727 aaPredicted RBP13.43□□□□□ -0.26
USP38-201ENST00000307017 PDIK1LQ8N165 341 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 ATP11CQ8NB49 1132 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 DHX35Q9H5Z1 703 aaKnown RBP13.43□□□□□ -0.26
USP38-201ENST00000307017 SPTLC1O15269 473 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 AKAP10O43572 662 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 KCNH2Q12809 1159 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 KCTD2Q14681 263 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 ADCK1Q86TW2 530 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 PNMA8BQ9ULN7 279 aaPredicted RBP13.43□□□□□ -0.26
USP38-201ENST00000307017 K7ERI5 159 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 ZBED6P86452 979 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 PPP1R18Q6NYC8 613 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 OR6P1Q8NGX9 317 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 GIPC2Q8TF65 315 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 DDX42Q86XP3 938 aaKnown RBP eCLIP13.42□□□□□ -0.26
USP38-201ENST00000307017 NDE1Q9NXR1 346 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 BMP3P12645 472 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 PPP3CCP48454 512 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 COASYQ13057 564 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 THEMIS2Q5TEJ8 643 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 TRIM42Q8IWZ5 723 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 PANX2Q96RD6 677 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 H0YC42 278 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 LMNAP02545 664 aaKnown RBP13.42□□□□□ -0.26
USP38-201ENST00000307017 MAPK10P53779 464 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 ORC1Q13415 861 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 ZNF699Q32M78 642 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 THTPAQ9BU02 230 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 SLC12A6Q9UHW9 1150 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 PCDHA6Q9UN73 950 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 PCDHA8Q9Y5H6 950 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 KCNN4O15554 427 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 TTI1O43156 1089 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 KCNA2P16389 499 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 TAC1P20366 129 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 PGM1P36871 562 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 AARSP49588 968 aaKnown RBP eCLIP13.42□□□□□ -0.26
USP38-201ENST00000307017 EPC2Q52LR7 807 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 TRPC7Q9HCX4 862 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 FAM217BQ9NTX9 383 aaPredicted RBP13.42□□□□□ -0.26
USP38-201ENST00000307017 CLCA2Q9UQC9 943 aa13.42□□□□□ -0.26
USP38-201ENST00000307017 CUL7Q14999 1698 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 DRAP1Q14919 205 aaPredicted RBP13.41□□□□□ -0.26
USP38-201ENST00000307017 ULK4Q96C45 1275 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 PNMA2Q9UL42 364 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 TSC22D4Q9Y3Q8 395 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 CCDC151A5D8V7 595 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 MCAMP43121 646 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 TRPC1P48995 793 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 CNGA3Q16281 694 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 SLC25A41Q8N5S1 370 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP38-201ENST00000307017 PGBD4Q96DM1 585 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 NACC1Q96RE7 527 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 AP5M1Q9H0R1 490 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 RAD18Q9NS91 495 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
USP38-201ENST00000307017 DUOX2Q9NRD8 1548 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 DEPDC1Q5TB30 811 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 SPON2Q9BUD6 331 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 RUBCNLQ9H714 662 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 PCMTD2Q9NV79 361 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 USE1Q9NZ43 259 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 CYP26A1O43174 497 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 GNA15P30679 374 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 WDR75Q8IWA0 830 aaKnown RBP13.41□□□□□ -0.26
USP38-201ENST00000307017 FAM205CA6NFA0 338 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 AOC3Q16853 763 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 GJB7Q6PEY0 223 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
USP38-201ENST00000307017 KIAA0586Q9BVV6 1533 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 IKBKBO14920 756 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 ARHGEF9O43307 516 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 GH2P01242 217 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
USP38-201ENST00000307017 NEK2P51955 445 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 ARL4CP56559 192 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 OVGP1Q12889 678 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 ZBTB18Q99592 522 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
USP38-201ENST00000307017 TMA7Q9Y2S6 64 aaKnown RBP13.41□□□□□ -0.26
USP38-201ENST00000307017 ORC4O43929 436 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 TRIM25Q14258 630 aaKnown RBP13.4□□□□□ -0.26
USP38-201ENST00000307017 HLFQ16534 295 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
USP38-201ENST00000307017 IZUMO3Q5VZ72 239 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms