RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CCDC122Q5T0U0 273 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 EHBP1Q8NDI1 1231 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 DEPTORQ8TB45 409 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 POMGNT1Q8WZA1 660 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 SMARCAD1Q9H4L7 1026 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 MYO1AQ9UBC5 1043 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 USP20Q9Y2K6 914 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 LRRIQ4A6NIV6 560 aa24.26■■□□□ 1.47
SMAD1-201ENST00000302085 IGF2BP3O00425 579 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMAD1-201ENST00000302085 HNRNPDLO14979 420 aaKnown RBP24.26■■□□□ 1.47
SMAD1-201ENST00000302085 MAPK4P31152 587 aa24.26■■□□□ 1.47
SMAD1-201ENST00000302085 VAV2P52735 878 aa24.26■■□□□ 1.47
SMAD1-201ENST00000302085 MKRN4PQ13434 485 aaPredicted RBP24.26■■□□□ 1.47
SMAD1-201ENST00000302085 LAMC2Q13753 1193 aa24.26■■□□□ 1.47
SMAD1-201ENST00000302085 BICD1Q96G01 975 aa24.26■■□□□ 1.47
SMAD1-201ENST00000302085 CPA4Q9UI42 421 aa24.26■■□□□ 1.47
SMAD1-201ENST00000302085 GARTP22102 1010 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 GCLMP48507 274 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 GFPT1Q06210 699 aaPredicted RBP24.25■■□□□ 1.47
SMAD1-201ENST00000302085 KLHL30Q0D2K2 578 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 MAML3Q96JK9 1138 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 MFSD14AQ96MC6 490 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 ZNF215Q9UL58 517 aaPredicted RBP24.25■■□□□ 1.47
SMAD1-201ENST00000302085 TRPM7Q96QT4 1865 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 RBAK-RBAKDNI3L0D1 243 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 SCP2P22307 547 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 CAPSQ13938 189 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 PRPF31Q8WWY3 499 aaKnown RBP24.25■■□□□ 1.47
SMAD1-201ENST00000302085 IFIH1Q9BYX4 1025 aaKnown RBP24.25■■□□□ 1.47
SMAD1-201ENST00000302085 DUSP10Q9Y6W6 482 aa24.25■■□□□ 1.47
SMAD1-201ENST00000302085 IGKV6-21A0A0C4DH24 114 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 K7ERI5 159 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 P4HA2O15460 535 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 SLU7O95391 586 aaKnown RBP24.24■■□□□ 1.47
SMAD1-201ENST00000302085 GH1P01241 217 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 ADCYAP1R1P41586 468 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 SLC26A2P50443 739 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 STRN3Q13033 797 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 ENOX2Q16206 610 aaKnown RBP24.24■■□□□ 1.47
SMAD1-201ENST00000302085 IER5Q5VY09 327 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 NPLOC4Q8TAT6 608 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 SUGCTQ9HAC7 445 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 DNAJC12Q9UKB3 198 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 STYXL1Q9Y6J8 313 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 ADGRA2Q96PE1 1338 aa24.24■■□□□ 1.47
SMAD1-201ENST00000302085 SLC15A5A6NIM6 579 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 KRT86O43790 486 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 N4BP1O75113 896 aaKnown RBP24.23■■□□□ 1.47
SMAD1-201ENST00000302085 LIG4P49917 911 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 EPC2Q52LR7 807 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 PARD3BQ8TEW8 1205 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 TMEM117Q9H0C3 514 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 TMEM134Q9H6X4 195 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 PMM2O15305 246 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 ADCY3O60266 1144 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 PIGRP01833 764 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 MAGEA1P43355 309 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 GPD1LQ8N335 351 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 TMC2Q8TDI7 906 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 TRAPPC12Q8WVT3 735 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 STK33Q9BYT3 514 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 RNPEPQ9H4A4 650 aa24.23■■□□□ 1.47
SMAD1-201ENST00000302085 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.22■■□□□ 1.47
SMAD1-201ENST00000302085 MANSC4A6NHS7 340 aaPredicted RBP24.22■■□□□ 1.47
SMAD1-201ENST00000302085 LRRN2O75325 713 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 CYP24A1Q07973 514 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 KIF5AQ12840 1032 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 PHLDB3Q6NSJ2 640 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 SAPCD2Q86UD0 394 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 CCDC127Q96BQ5 260 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 POP1Q99575 1024 aaKnown RBP24.22■■□□□ 1.47
SMAD1-201ENST00000302085 TRPC6Q9Y210 931 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 LRRIQ3A6PVS8 624 aaPredicted RBP24.22■■□□□ 1.47
SMAD1-201ENST00000302085 HBP1O60381 514 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 EDN1P05305 212 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 PRKCIP41743 596 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 PTK2Q05397 1052 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 NAA30Q147X3 362 aaPredicted RBP24.22■■□□□ 1.47
SMAD1-201ENST00000302085 ZNF571Q7Z3V5 609 aaPredicted RBP24.22■■□□□ 1.47
SMAD1-201ENST00000302085 LRRC71Q8N4P6 559 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 LRRN4CLQ8ND94 238 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 AFG1LQ8WV93 481 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 TCP11Q8WWU5 503 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 EMID1Q96A84 441 aaPredicted RBP24.22■■□□□ 1.47
SMAD1-201ENST00000302085 FAM213AQ9BRX8 229 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 TINF2Q9BSI4 451 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 APEX2Q9UBZ4 518 aa24.22■■□□□ 1.47
SMAD1-201ENST00000302085 BZW2Q9Y6E2 419 aaKnown RBP24.22■■□□□ 1.47
SMAD1-201ENST00000302085 PNMA6AP0CW24 399 aaPredicted RBP24.21■■□□□ 1.47
SMAD1-201ENST00000302085 STAT1P42224 750 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 LAMTOR4Q0VGL1 99 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 CETN1Q12798 172 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 DRAP1Q14919 205 aaPredicted RBP24.21■■□□□ 1.47
SMAD1-201ENST00000302085 RGMBQ6NW40 437 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 EXOC8Q8IYI6 725 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 PPTC7Q8NI37 304 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 ZBTB45Q96K62 511 aaPredicted RBP24.21■■□□□ 1.47
SMAD1-201ENST00000302085 TARS2Q9BW92 718 aaKnown RBP24.21■■□□□ 1.47
SMAD1-201ENST00000302085 TSGA10Q9BZW7 698 aa24.21■■□□□ 1.47
SMAD1-201ENST00000302085 GPR88Q9GZN0 384 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms