RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 WNK3Q9BYP7 1800 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.46■□□□□ 0.07
CDT1-201ENST00000301019 POC1B-GALNT4F8VUJ3 575 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 CETPP11597 493 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 VHLP40337 213 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 ZYXQ15942 572 aaKnown RBP15.46■□□□□ 0.07
CDT1-201ENST00000301019 FAM98CQ17RN3 349 aaKnown RBP15.46■□□□□ 0.07
CDT1-201ENST00000301019 SGSM1Q2NKQ1 1148 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 Q4G0T1 1027 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 SV2BQ7L1I2 683 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 VPS52Q8N1B4 723 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 C1orf54Q8WWF1 131 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 CLPTM1LQ96KA5 538 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 CDC42EP4Q9H3Q1 356 aaKnown RBP15.46■□□□□ 0.07
CDT1-201ENST00000301019 ARHGEF38Q9NXL2 777 aa15.46■□□□□ 0.07
CDT1-201ENST00000301019 USP17L12C9JPN9 530 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 USP17L21D6R901 530 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 KIAA0391O15091 583 aaKnown RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 MARCH6O60337 910 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 H2AFZP0C0S5 128 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 GALCP54803 685 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 DYNC1I2Q13409 638 aaKnown RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 ACAP1Q15027 740 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 SEC23AQ15436 765 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ZNF746Q6NUN9 644 aaPredicted RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 TTC27Q6P3X3 843 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 IZUMO2Q6UXV1 221 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 H2AFVQ71UI9 128 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 TMTC2Q8N394 836 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 PDCD7Q8N8D1 485 aaKnown RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 LRRC57Q8N9N7 239 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 SLC35G2Q8TBE7 412 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 DDX12PQ92771 950 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ZWILCHQ9H900 591 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 STOML1Q9UBI4 398 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ASIC3Q9UHC3 531 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 NUMBLQ9Y6R0 609 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ABCC12Q96J65 1359 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ZBED4O75132 1171 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 OAS1P00973 400 aaKnown RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 CDR2Q01850 454 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 LBRQ14739 615 aaKnown RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 LRRC74BQ6ZQY2 392 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 NT5DC3Q86UY8 548 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 PPFIBP2Q8ND30 876 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ZFAND2BQ8WV99 257 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 SLC7A6OSQ96CW6 309 aaPredicted RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 MIPEPQ99797 713 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ARMCX1Q9P291 453 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 MTRF1LQ9UGC7 380 aaKnown RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 COL4A3BPQ9Y5P4 624 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 C5P01031 1676 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 LRRN2O75325 713 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 CAPN15O75808 1086 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 T-ENOLP0DO92 83 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ACADSP16219 412 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 DESP17661 470 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 CENPPQ6IPU0 288 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 ATG4AQ8WYN0 398 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 FAM136AQ96C01 138 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 KLF6Q99612 283 aaPredicted RBP15.45■□□□□ 0.06
CDT1-201ENST00000301019 TSG101Q99816 390 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 TAS2R14Q9NYV8 317 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 PHTF1Q9UMS5 762 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 LRCH1Q9Y2L9 728 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 CNTNAP5Q8WYK1 1306 aa15.45■□□□□ 0.06
CDT1-201ENST00000301019 TSPY2A6NKD2 308 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 BOLA2-SMG1P6H3BVE0 249 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 CCDC188H7C350 402 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 GOLGA8RI6L899 631 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 KCNH2Q12809 1159 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 ARHGAP44Q17R89 818 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 DUPD1Q68J44 220 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 IRGCQ6NXR0 463 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 CCDC137Q6PK04 289 aaKnown RBP15.44■□□□□ 0.06
CDT1-201ENST00000301019 SATL1Q86VE3 508 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 RBM46Q8TBY0 533 aaKnown RBP15.44■□□□□ 0.06
CDT1-201ENST00000301019 RPGRQ92834 1020 aaKnown RBP15.44■□□□□ 0.06
CDT1-201ENST00000301019 BCAS3Q9H6U6 928 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 HEMK1Q9Y5R4 338 aaPredicted RBP15.44■□□□□ 0.06
CDT1-201ENST00000301019 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.44■□□□□ 0.06
CDT1-201ENST00000301019 AMPD1P23109 780 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 ZBTB16Q05516 673 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 PDIA5Q14554 519 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 LRRC55Q6ZSA7 311 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 ARHGEF26Q96DR7 871 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 CALML4Q96GE6 196 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 CLMNQ96JQ2 1002 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 NAP1L3Q99457 506 aaPredicted RBP15.44■□□□□ 0.06
CDT1-201ENST00000301019 SLITRK6Q9H5Y7 841 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 DMAP1Q9NPF5 467 aaPredicted RBP15.44■□□□□ 0.06
CDT1-201ENST00000301019 TMEM260Q9NX78 707 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 ATXN10Q9UBB4 475 aa15.44■□□□□ 0.06
CDT1-201ENST00000301019 RASA4BC9J798 803 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 RASA4O43374 803 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 GJB6O95452 261 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 LYNP07948 512 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 KCTD21Q4G0X4 260 aa15.43■□□□□ 0.06
CDT1-201ENST00000301019 FBXO6Q9NRD1 293 aaPredicted RBP15.43■□□□□ 0.06
CDT1-201ENST00000301019 ZFP69BQ9UJL9 534 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms