RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PDXKO00764 312 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 CLDN3O15551 220 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 PRKCIP41743 596 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 SNAP25P60880 206 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 KRT17Q04695 432 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 TBC1D10BQ4KMP7 808 aaPredicted RBP12.24□□□□□ -0.45
TRUB1-201ENST00000298746 ZDHHC24Q6UX98 284 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 RNF207Q6ZRF8 634 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 PALB2Q86YC2 1186 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 RNF217Q8TC41 542 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 PCIF1Q9H4Z3 704 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 INTUQ9ULD6 942 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 RABGAP1Q9Y3P9 1069 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 DDX60Q8IY21 1712 aaKnown RBP12.24□□□□□ -0.45
TRUB1-201ENST00000298746 MIF4GDA9UHW6 222 aaKnown RBP12.24□□□□□ -0.45
TRUB1-201ENST00000298746 GAS8O95995 478 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 GNAT1P11488 350 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 ATF2P15336 505 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 ZRSR2Q15696 482 aaKnown RBP12.24□□□□□ -0.45
TRUB1-201ENST00000298746 HHATQ5VTY9 493 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 TMEM154Q6P9G4 183 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 EPM2AIP1Q7L775 607 aaPredicted RBP12.24□□□□□ -0.45
TRUB1-201ENST00000298746 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 SLC20A1Q8WUM9 679 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 STK33Q9BYT3 514 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 VCXQ9H320 206 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 BCAS3Q9H6U6 928 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 DLGAP2Q9P1A6 1054 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 ANAPC5Q9UJX4 755 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 TIAM2Q8IVF5 1701 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 ADAMTS7Q9UKP4 1686 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 CAMTA1Q9Y6Y1 1673 aa12.24□□□□□ -0.45
TRUB1-201ENST00000298746 PHRF1Q9P1Y6 1649 aaKnown RBP12.24□□□□□ -0.45
TRUB1-201ENST00000298746 NUP188Q5SRE5 1749 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 PFASO15067 1338 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 FOXN3O00409 490 aaPredicted RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 DDX3YO15523 660 aaKnown RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 COILP38432 576 aaPredicted RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 NPEPPSP55786 919 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 BNIP1Q12981 228 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 GRIK5Q16478 980 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 ASPRV1Q53RT3 343 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 INTS5Q6P9B9 1019 aaKnown RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 SLFN11Q7Z7L1 901 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 CATSPER3Q86XQ3 398 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 PPM1KQ8N3J5 372 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 ATG4AQ8WYN0 398 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 ZNF653Q96CK0 615 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 HEMGNQ9BXL5 484 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 RGL1Q9NZL6 768 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 STXBP5LQ9Y2K9 1186 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 TCRBV7S2A1N4TA0A589 114 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 ANKRD63C9JTQ0 380 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 FMO5P49326 533 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 FAM178BQ8IXR5 827 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 RPUSD2Q8IZ73 545 aaKnown RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 LRRC8CQ8TDW0 803 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 TEKT4Q8WW24 435 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 MCUR1Q96AQ8 359 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 PWWP2AQ96N64 755 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 TRIM4Q9C037 500 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 INTS2Q9H0H0 1204 aaKnown RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 ESYT2A0FGR8 921 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 MAPK13O15264 365 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 PYGMP11217 842 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 EEF2P13639 858 aaKnown RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 RASSF2P50749 326 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 GPC5P78333 572 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 GIT2Q14161 759 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 BTNL9Q6UXG8 535 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 SLC30A10Q6XR72 485 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 ZNF804AQ7Z570 1209 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 PAPOLBQ9NRJ5 636 aaKnown RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 DCTN4Q9UJW0 460 aa12.23□□□□□ -0.45
TRUB1-201ENST00000298746 CORO1CQ9ULV4 474 aaPredicted RBP12.23□□□□□ -0.45
TRUB1-201ENST00000298746 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 TTC27Q6P3X3 843 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 BRINP3Q76B58 766 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 APBB1IPQ7Z5R6 666 aaPredicted RBP12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 STMN2Q93045 179 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 RUSC1Q9BVN2 902 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ANO3Q9BYT9 981 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 VPS37BQ9H9H4 285 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 GRHL1Q9NZI5 618 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 SNUPNO95149 360 aaKnown RBP12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ATP4AP20648 1035 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 CA4P22748 312 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 KLC1Q07866 573 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 COG2Q14746 738 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 ARSHQ5FYA8 562 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 PPP1R21Q6ZMI0 780 aa12.22□□□□□ -0.45
TRUB1-201ENST00000298746 RFX8Q6ZV50 586 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms