RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SEMA4AQ9H3S1 761 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 STK24Q9Y6E0 443 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 GOLGA6L10A0A0M3HER8 536 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 SLC29A2Q14542 456 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 NBPF9Q3BBW0 867 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 MICALCLQ6ZW33 695 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 PRELID2Q8N945 189 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 C1orf131Q8NDD1 294 aaKnown RBP26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 CCDC127Q96BQ5 260 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 RAB17Q9H0T7 212 aa26.33■■□□□ 1.81
SPTSSA-201ENST00000298130 PDE6BP35913 854 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 ZDHHC24Q6UX98 284 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 KIFC3Q9BVG8 833 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 TEKT3Q9BXF9 490 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 HOMER2Q9NSB8 354 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 QSER1Q2KHR3 1735 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 CYP26A1O43174 497 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 RPL21P46778 160 aaKnown RBP26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 VAMP7P51809 220 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 DGKZQ13574 1117 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 SLC47A2Q86VL8 602 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 PPM1KQ8N3J5 372 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 CABS1Q96KC9 395 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 OSBPL7Q9BZF2 842 aa26.32■■□□□ 1.8
SPTSSA-201ENST00000298130 PPFIA2O75334 1257 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 PYGMP11217 842 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 PMS2P54278 862 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 MAP2K1Q02750 393 aaPredicted RBP26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 CCDC38Q502W7 563 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 CCDC25Q86WR0 208 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 CCDC13Q8IYE1 715 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 SEC16BQ96JE7 1060 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 AZI2Q9H6S1 392 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 COL20A1Q9P218 1284 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 KIAA0391O15091 583 aaKnown RBP26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 CLSTN1O94985 981 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 KIF22Q14807 665 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 CPLX4Q7Z7G2 160 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 NLGN1Q8N2Q7 840 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 CCDC113Q9H0I3 377 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 SERPINA10Q9UK55 444 aa26.31■■□□□ 1.8
SPTSSA-201ENST00000298130 PPP2R5AQ15172 486 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 C1orf220Q5T0J3 134 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 NOP9Q86U38 636 aaKnown RBP26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 LDHDQ86WU2 507 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 PRPF38AQ8NAV1 312 aaKnown RBP26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 SAAL1Q96ER3 474 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 ARHGEF10LQ9HCE6 1279 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 VIL1P09327 827 aaKnown RBP26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 BYSLQ13895 437 aaKnown RBP26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 AGBL2Q5U5Z8 902 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 C6orf89Q6UWU4 347 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 STXBP4Q6ZWJ1 553 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 MIER3Q7Z3K6 550 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 CPXCR1Q8N123 301 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 CNPY4Q8N129 248 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 VEZTQ9HBM0 779 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 NRXN2Q9P2S2 1712 aa26.3■■□□□ 1.8
SPTSSA-201ENST00000298130 GOLGA6L7A0A1B0GV03 622 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 DNM1LO00429 736 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 SLC16A4O15374 487 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 CTNND1O60716 968 aaKnown RBP26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 MMEP08473 750 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 BCRP11274 1271 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 EPC2Q52LR7 807 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 CCDC121Q6ZUS5 278 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 EPS8L3Q8TE67 593 aaKnown RBP26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 TXLNGYQ9BZA5 131 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 MTFR1LQ9H019 292 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 TTC7AQ9ULT0 858 aaPredicted RBP26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 FOXO6A8MYZ6 492 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 KCNH7Q9NS40 1196 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 DNAJC17Q9NVM6 304 aaKnown RBP26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 NFIBO00712 420 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 FSBPO95073 299 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 CHN1P15882 459 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 PDE4CQ08493 712 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 CD248Q9HCU0 757 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 TOPORSQ9NS56 1045 aaPredicted RBP26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 GRHL1Q9NZI5 618 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 HSPBP1Q9NZL4 362 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 SEL1LQ9UBV2 794 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 ODF2LQ9ULJ1 636 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 ZHX2Q9Y6X8 837 aa26.29■■□□□ 1.8
SPTSSA-201ENST00000298130 YDJCA8MPS7 323 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 CCDC172P0C7W6 258 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 PTGIRP43119 386 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 C2CD6Q53TS8 623 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 CC2D2BQ6DHV5 1058 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 CCDC137Q6PK04 289 aaKnown RBP26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 DHX38Q92620 1227 aaKnown RBP26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 MYH11P35749 1972 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 KIF13BQ9NQT8 1826 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 ADRB2P07550 413 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 CHRNB2P17787 502 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 IFNAR2P48551 515 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 PEX3P56589 373 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 DENND2CQ68D51 928 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 CBWD2Q8IUF1 395 aa26.28■■□□□ 1.8
SPTSSA-201ENST00000298130 NEK9Q8TD19 979 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms