RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 AIPL1Q9NZN9 384 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 MYO6Q9UM54 1294 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 ZNF236Q9UL36 1845 aa15.52■□□□□ 0.08
C9orf3-202ENST00000297979 MANSC4A6NHS7 340 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-202ENST00000297979 AKR1B10O60218 316 aa15.52■□□□□ 0.08
C9orf3-202ENST00000297979 N4BP1O75113 896 aaKnown RBP15.52■□□□□ 0.08
C9orf3-202ENST00000297979 ARHGAP1Q07960 439 aa15.52■□□□□ 0.08
C9orf3-202ENST00000297979 ASIC2Q16515 512 aa15.52■□□□□ 0.08
C9orf3-202ENST00000297979 TDRD12Q587J7 1177 aaKnown RBP15.52■□□□□ 0.08
C9orf3-202ENST00000297979 MAMDC4Q6UXC1 1216 aa15.52■□□□□ 0.08
C9orf3-202ENST00000297979 GPIHBP1Q8IV16 184 aa15.52■□□□□ 0.08
C9orf3-202ENST00000297979 ZSWIM2Q8NEG5 633 aa15.52■□□□□ 0.08
C9orf3-202ENST00000297979 L2HGDHQ9H9P8 463 aa15.52■□□□□ 0.08
C9orf3-202ENST00000297979 RBM47A0AV96 593 aaKnown RBP15.52■□□□□ 0.07
C9orf3-202ENST00000297979 GOLGA8IPA6NC78 632 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 LRRIQ4A6NIV6 560 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 GOLGA8JA6NMD2 632 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 DLG4P78352 724 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 STRN3Q13033 797 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 LAMC2Q13753 1193 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 PLCB4Q15147 1175 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 SNRNP35Q16560 246 aaKnown RBP15.52■□□□□ 0.07
C9orf3-202ENST00000297979 POMGNT1Q8WZA1 660 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 MYO1AQ9UBC5 1043 aa15.52■□□□□ 0.07
C9orf3-202ENST00000297979 GAS2O43903 313 aaKnown RBP15.51■□□□□ 0.07
C9orf3-202ENST00000297979 LCA5LO95447 670 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 ABL1P00519 1130 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 GH1P01241 217 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 ADRB2P07550 413 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 GARTP22102 1010 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 EXOC8Q8IYI6 725 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 CEP120Q8N960 986 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 JAKMIP2Q96AA8 810 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 SAAL1Q96ER3 474 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 MAML3Q96JK9 1138 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 KATNBL1Q9H079 304 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
C9orf3-202ENST00000297979 ADGRA2Q96PE1 1338 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 DYNC1I1O14576 645 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 ZNF263O14978 683 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 SNAI1O95863 264 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-202ENST00000297979 CYP27A1Q02318 531 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 ASTE1Q2TB18 679 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-202ENST00000297979 ZNF569Q5MCW4 686 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 CBWD2Q8IUF1 395 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 FBXL18Q96ME1 805 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 INTS2Q9H0H0 1204 aaKnown RBP15.51■□□□□ 0.07
C9orf3-202ENST00000297979 CPA4Q9UI42 421 aa15.51■□□□□ 0.07
C9orf3-202ENST00000297979 SLC15A5A6NIM6 579 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 IGF2BP3O00425 579 aaKnown RBP eCLIP15.5■□□□□ 0.07
C9orf3-202ENST00000297979 P4HA2O15460 535 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 LIG4P49917 911 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 VAV2P52735 878 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 MCCD1P59942 119 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-202ENST00000297979 CCDC122Q5T0U0 273 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 TCP11Q8WWU5 503 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 DAAM1Q9Y4D1 1078 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 ZBTB42B2RXF5 422 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 KRT86O43790 486 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 URI1O94763 535 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-202ENST00000297979 JAM2P57087 298 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 PPP3CAQ08209 521 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 KLHL30Q0D2K2 578 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 CETN1Q12798 172 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 CAPSQ13938 189 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 C1orf220Q5T0J3 134 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 GJC2Q5T442 439 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-202ENST00000297979 IER5Q5VY09 327 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 IQCEQ6IPM2 695 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 PLEKHO2Q8TD55 490 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 IFIH1Q9BYX4 1025 aaKnown RBP15.5■□□□□ 0.07
C9orf3-202ENST00000297979 TRIM10Q9UDY6 481 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 AJAP1Q9UKB5 411 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-202ENST00000297979 GUCA1BQ9UMX6 200 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 TRPC6Q9Y210 931 aa15.5■□□□□ 0.07
C9orf3-202ENST00000297979 K7ERI5 159 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 CTIFO43310 598 aaKnown RBP15.49■□□□□ 0.07
C9orf3-202ENST00000297979 ADCYAP1R1P41586 468 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 ARID5AQ03989 594 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 RGMBQ6NW40 437 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 GJB7Q6PEY0 223 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 SAPCD2Q86UD0 394 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 GPD1LQ8N335 351 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 EMID1Q96A84 441 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-202ENST00000297979 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-202ENST00000297979 TSGA10Q9BZW7 698 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 TMEM134Q9H6X4 195 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 ERAP1Q9NZ08 941 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 PCDHA13Q9Y5I0 950 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 IGKV6-21A0A0C4DH24 114 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 HBP1O60381 514 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 PIGRP01833 764 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 DRP2Q13474 957 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 TAF1CQ15572 869 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-202ENST00000297979 PPTC7Q8NI37 304 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 TINF2Q9BSI4 451 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 SLC5A4Q9NY91 659 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 APEX2Q9UBZ4 518 aa15.49■□□□□ 0.07
C9orf3-202ENST00000297979 TFR2Q9UP52 801 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms