RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.83■□□□□ 0.28
UBAP1-201ENST00000297661 CALUO43852 315 aaPredicted RBP16.83■□□□□ 0.28
UBAP1-201ENST00000297661 KIF4AO95239 1232 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 MTMR3Q13615 1198 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 ZYXQ15942 572 aaKnown RBP16.83■□□□□ 0.28
UBAP1-201ENST00000297661 MIS18BP1Q6P0N0 1132 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 RDH13Q8NBN7 331 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 ZBTB10Q96DT7 871 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 FAM129AQ9BZQ8 928 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 LRRC4CQ9HCJ2 640 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 LTBP3Q9NS15 1303 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 ANKRD33BA6NCL7 494 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 TGFB1I1O43294 461 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 DIAPH2O60879 1101 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 SREBF1P36956 1147 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 Q4G0T1 1027 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 KIAA1755Q5JYT7 1200 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 RBM26Q5T8P6 1007 aaKnown RBP16.82■□□□□ 0.28
UBAP1-201ENST00000297661 RINT1Q6NUQ1 792 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 MAEAQ7L5Y9 396 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
UBAP1-201ENST00000297661 DYDC2Q96IM9 177 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 WDR18Q9BV38 432 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.82■□□□□ 0.285e-7■■■■■ 94.9
UBAP1-201ENST00000297661 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 BMP3P12645 472 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 ABCB4P21439 1286 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 CYP2J2P51589 502 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 SLMAPQ14BN4 828 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 FAM133BQ5BKY9 247 aaKnown RBP16.82■□□□□ 0.28
UBAP1-201ENST00000297661 ADAT2Q7Z6V5 191 aaKnown RBP16.82■□□□□ 0.28
UBAP1-201ENST00000297661 METTL13Q8N6R0 699 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 GLT8D2Q9H1C3 349 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 CNOT10Q9H9A5 744 aaKnown RBP16.82■□□□□ 0.28
UBAP1-201ENST00000297661 OSGEPQ9NPF4 335 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 TYW1Q9NV66 732 aaKnown RBP16.82■□□□□ 0.28
UBAP1-201ENST00000297661 PKD2L1Q9P0L9 805 aa16.82■□□□□ 0.28
UBAP1-201ENST00000297661 CFAP73A6NFT4 308 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 DDX3XO00571 662 aaKnown RBP eCLIP16.81■□□□□ 0.281e-12■■■■□ 23.9
UBAP1-201ENST00000297661 PDXKO00764 312 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 LRRC57Q8N9N7 239 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 SPDYE1Q8NFV5 336 aaPredicted RBP16.81■□□□□ 0.28
UBAP1-201ENST00000297661 ZNF317Q96PQ6 595 aaPredicted RBP16.81■□□□□ 0.28
UBAP1-201ENST00000297661 FAM13AO94988 1023 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 ZNF268Q14587 947 aaPredicted RBP16.81■□□□□ 0.28
UBAP1-201ENST00000297661 TMEM179Q6ZVK1 233 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 GLYCTKQ8IVS8 523 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 HOMER3Q9NSC5 361 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 ETAA1Q9NY74 926 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 PRR12Q9ULL5 1215 aa16.81■□□□□ 0.28
UBAP1-201ENST00000297661 FZD9O00144 591 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 EGFRP00533 1210 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 COPB2P35606 906 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 GRIPAP1Q4V328 841 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 CIAPIN1Q6FI81 312 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 PEX26Q7Z412 305 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 DAAM2Q86T65 1068 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 TPCN2Q8NHX9 752 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 CCDC26Q8TAB7 109 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 ACER1Q8TDN7 264 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 SEPT11Q9NVA2 429 aaKnown RBP16.8■□□□□ 0.28
UBAP1-201ENST00000297661 WRAP73Q9P2S5 460 aaPredicted RBP16.8■□□□□ 0.28
UBAP1-201ENST00000297661 PNMA2Q9UL42 364 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 NOC2LQ9Y3T9 749 aaKnown RBP16.8■□□□□ 0.28
UBAP1-201ENST00000297661 SIPA1L1O43166 1804 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 DDX39AO00148 427 aaKnown RBP16.8■□□□□ 0.28
UBAP1-201ENST00000297661 SART1O43290 800 aaKnown RBP16.8■□□□□ 0.28
UBAP1-201ENST00000297661 AP1G2O75843 785 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 ITIH4Q14624 930 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
UBAP1-201ENST00000297661 TATDN1Q6P1N9 297 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 TMC3Q7Z5M5 1100 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 CENPTQ96BT3 561 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 CELF4Q9BZC1 486 aaKnown RBP16.8■□□□□ 0.28
UBAP1-201ENST00000297661 AMACRQ9UHK6 382 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 AGAP1Q9UPQ3 857 aa16.8■□□□□ 0.28
UBAP1-201ENST00000297661 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
UBAP1-201ENST00000297661 ZMYM2Q9UBW7 1377 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 DAPK3O43293 454 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 LRRN2O75325 713 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 CBWD6Q4V339 395 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 CBWD3Q5JTY5 395 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 CBWD5Q5RIA9 395 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 DACT2Q5SW24 774 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 TRPM8Q7Z2W7 1104 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 FAM186BQ8IYM0 893 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 LNX1Q8TBB1 728 aaPredicted RBP16.79■□□□□ 0.28
UBAP1-201ENST00000297661 SCFD2Q8WU76 684 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 SH2D3AQ9BRG2 576 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 TRIM31Q9BZY9 425 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 YIPF3Q9GZM5 350 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 SLC5A4Q9NY91 659 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 CORO1CQ9ULV4 474 aaPredicted RBP16.79■□□□□ 0.28
UBAP1-201ENST00000297661 IRF6O14896 467 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 ASAP2O43150 1006 aa16.79■□□□□ 0.28
UBAP1-201ENST00000297661 EVI5O60447 810 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms