RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 EMSYQ7Z589 1322 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 H0YCG3 227 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 H0YGN5 161 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PODXLO00592 558 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PPFIA2O75334 1257 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 KRT14P02533 472 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 FGGP02679 453 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 TRIM49P0CI25 452 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 TRIM49CP0CI26 452 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 POLD1P28340 1107 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 CTNNA1P35221 906 aaKnown RBP10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MXI1P50539 228 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 SMTNP53814 917 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MFAP3P55082 362 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PSMC5P62195 406 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ITGB3BPQ13352 177 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 CEP85LQ5SZL2 805 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PHLDB3Q6NSJ2 640 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 TMC3Q7Z5M5 1100 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 HOOK3Q86VS8 718 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 TMC2Q8TDI7 906 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 CLEC4DQ8WXI8 215 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PLVAPQ9BX97 442 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 DDX47Q9H0S4 455 aaKnown RBP10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 CNOT10Q9H9A5 744 aaKnown RBP10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 HSPBP1Q9NZL4 362 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 UVRAGQ9P2Y5 699 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 NFS1Q9Y697 457 aa10.81□□□□□ -0.68
TNFRSF11B-201ENST00000297350 WDR64B1ANS9 1081 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MAFGO15525 162 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ZC3H11AO75152 810 aaKnown RBP eCLIP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 LSP1P33241 339 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MDH1P40925 334 aaKnown RBP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MRPS25P82663 173 aaKnown RBP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 DR1Q01658 176 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MTMR1Q13613 665 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 TNFAIP1Q13829 316 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 HAUS6Q7Z4H7 955 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 HOMEZQ8IX15 550 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 FAM71AQ8IYT1 594 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 SPIRE2Q8WWL2 714 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 HOOK2Q96ED9 719 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 SENP7Q9BQF6 1050 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 AP1M1Q9BXS5 423 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PGAP2Q9UHJ9 254 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 COQ4Q9Y3A0 265 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 CLRN2A0PK11 232 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 FOXN3O00409 490 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 NDUFAB1O14561 156 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PHF2O75151 1096 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 TAL1P17542 331 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 YWHABP31946 246 aaKnown RBP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 RTP1P59025 263 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 DUPD1Q68J44 220 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 FOXR1Q6PIV2 292 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 LARGE2Q8N3Y3 721 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 DHX38Q92620 1227 aaKnown RBP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 KIFAP3Q92845 792 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 KCNN1Q92952 543 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ZSWIM1Q9BR11 485 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ERP44Q9BS26 406 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 SLC38A10Q9HBR0 1119 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 UBE2TQ9NPD8 197 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ZNF219Q9P2Y4 722 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PCYOX1Q9UHG3 505 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MTUS1Q9ULD2 1270 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PPP1R9AQ9ULJ8 1098 aa10.8□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ZBTB39O15060 712 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PAEPP09466 180 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 NUDT17P0C025 328 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 VCAM1P19320 739 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 CTNNA2P26232 953 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 CCT5P48643 541 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 RNASE9P60153 205 aaKnown RBP10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ZNF844Q08AG5 666 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PTGISQ16647 500 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ZNF746Q6NUN9 644 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 PPP1R2P3Q6NXS1 205 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MAP4K3Q8IVH8 894 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 C10orf67Q8IYJ2 551 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 SHC3Q92529 594 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 FMO2Q99518 471 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 HINFPQ9BQA5 517 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 TXLNGYQ9BZA5 131 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 THAP2Q9H0W7 228 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 TAOK3Q9H2K8 898 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 OSGEPQ9NPF4 335 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 CTTNBP2NLQ9P2B4 639 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 AMACRQ9UHK6 382 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 LCMT1Q9UIC8 334 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ZNRF3Q9ULT6 936 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 KIAA0391O15091 583 aaKnown RBP10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 GPC3P51654 580 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 UBXN2AP68543 259 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 DRP2Q13474 957 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 UAP1Q16222 522 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 ARHGAP44Q17R89 818 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 SEL1L2Q5TEA6 688 aa10.79□□□□□ -0.68
TNFRSF11B-201ENST00000297350 KRT39Q6A163 491 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms