RNA–Protein interactions for RNA: ENST00000293925.9

CRAMP1-201, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-201ENST00000293925 CHRNA3P32297 505 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 SPDYE7PQ495Y7 208 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 ZNF667Q5HYK9 610 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 LRRC31Q6UY01 552 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 H2AFY2Q9P0M6 372 aaPredicted RBP17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 BLOC1S6Q9UL45 172 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 TOMM70O94826 608 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 PSAPP07602 524 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 KIF23Q02241 960 aaPredicted RBP17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 SLC10A5Q5PT55 438 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 ROR1Q01973 937 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 WWP1Q9H0M0 922 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 C10orf88Q9H8K7 445 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 SOX13Q9UN79 622 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 ASAP2O43150 1006 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 ASIC4Q96FT7 647 aa17.1■□□□□ 0.33
CRAMP1-201ENST00000293925 C5orf58C9J3I9 102 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 NCK2O43639 380 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 ADORA1P30542 326 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 WASHC5Q12768 1159 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 FGD2Q7Z6J4 655 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 SCN4BQ8IWT1 228 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 ATP11CQ8NB49 1132 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 CYFIP2Q96F07 1278 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 CDHR1Q96JP9 859 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 XPO1O14980 1071 aaKnown RBP17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 DLGAP3O95886 979 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 THEM5Q8N1Q8 247 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 FGFR4P22455 802 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 CHRNDQ07001 517 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 USP17L2Q6R6M4 530 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 HORMAD1Q86X24 394 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 MRPL1Q9BYD6 325 aaKnown RBP17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 CXorf56Q9H5V9 222 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 BTKQ06187 659 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 NME3Q13232 169 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 CDC37Q16543 378 aaPredicted RBP17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 PKN3Q6P5Z2 889 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 TMEM270Q6UE05 265 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 DDX47Q9H0S4 455 aaKnown RBP17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 CLRN2A0PK11 232 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 ZBTB38Q8NAP3 1195 aaPredicted RBP17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 ZNF564Q8TBZ8 553 aaPredicted RBP17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 ZFP42Q96MM3 310 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 SMAD5Q99717 465 aaKnown RBP17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 ACCSLQ4AC99 568 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 ARHGAP17Q68EM7 881 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 CEP72Q9P209 647 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 HDAC6Q9UBN7 1215 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
CRAMP1-201ENST00000293925 TARSL2A2RTX5 802 aaKnown RBP17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 ABCE1P61221 599 aaKnown RBP17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 SP110Q9HB58 689 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 HSPBP1Q9NZL4 362 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 MAP3K15Q6ZN16 1313 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 PHKA1P46020 1223 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 TRIM71Q2Q1W2 868 aaKnown RBP17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 SPATA21Q7Z572 469 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 TEX2Q8IWB9 1127 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 CCT7Q99832 543 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 THTPAQ9BU02 230 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 POLE3Q9NRF9 147 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 RCOR1Q9UKL0 485 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.33
CRAMP1-201ENST00000293925 TSC22D2O75157 780 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 CALB1P05937 261 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 ZNF699Q32M78 642 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 C6orf10Q5SRN2 563 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 DIS3LQ8TF46 1054 aaKnown RBP17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 AFG1LQ8WV93 481 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 HMOX2P30519 316 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 IL13P35225 146 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 ALCAMQ13740 583 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 MFN1Q8IWA4 741 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 PIGOQ8TEQ8 1089 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.08■□□□□ 0.321e-7■■□□□ 13.5
CRAMP1-201ENST00000293925 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 CCNA1P78396 465 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 TMEM35BQ8NCS4 154 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 SSH3Q8TE77 659 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 PLEKHA8Q96JA3 519 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 EPC1Q9H2F5 836 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 CYTH3O43739 400 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 PYGMP11217 842 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 TCN1P20061 433 aaPredicted RBP17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 MAP4K1Q92918 833 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 C6orf203Q9P0P8 240 aaPredicted RBP17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 NESP48681 1621 aa17.08■□□□□ 0.32
CRAMP1-201ENST00000293925 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
CRAMP1-201ENST00000293925 GOLPH3LQ9H4A5 285 aa17.07■□□□□ 0.32
CRAMP1-201ENST00000293925 LRRC53A6NM62 1247 aa17.07■□□□□ 0.32
CRAMP1-201ENST00000293925 GYS1P13807 737 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms