RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SLC8A2Q9UPR5 921 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
PTCD1-201ENST00000292478 ART3Q13508 389 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 NR1I3Q14994 352 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 FBXO33Q7Z6M2 555 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 STK33Q9BYT3 514 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 AGO2Q9UKV8 859 aaKnown RBP13.63□□□□□ -0.23
PTCD1-201ENST00000292478 NOC2LQ9Y3T9 749 aaKnown RBP13.63□□□□□ -0.23
PTCD1-201ENST00000292478 CPS1P31327 1500 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 NRXN1Q9ULB1 1477 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 DIP2AQ14689 1571 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 MX2P20592 715 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 CDC42EP1Q00587 391 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 DUOXA2Q1HG44 320 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 EPM2AIP1Q7L775 607 aaPredicted RBP13.63□□□□□ -0.23
PTCD1-201ENST00000292478 RBAKQ9NYW8 714 aaPredicted RBP13.63□□□□□ -0.23
PTCD1-201ENST00000292478 A0A1W2PQJ5 194 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 MAP3K7O43318 606 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 SYT2Q8N9I0 419 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-201ENST00000292478 ORC6Q9Y5N6 252 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 USP27XA6NNY8 438 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 SCP2P22307 547 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 GCKP35557 465 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 ANTXR2P58335 489 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 SLC18A3Q16572 532 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 NBPF9Q3BBW0 867 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 FSCBQ5H9T9 825 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 ELMSAN1Q6PJG2 1045 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 RYBPQ8N488 228 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-201ENST00000292478 MMP19Q99542 508 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 TRIM15Q9C019 465 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 KLHL8Q9P2G9 620 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-201ENST00000292478 GUCY2CP25092 1073 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 PMLP29590 882 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 YWHABP31946 246 aaKnown RBP13.62□□□□□ -0.23
PTCD1-201ENST00000292478 PSMC1P62191 440 aaKnown RBP13.62□□□□□ -0.23
PTCD1-201ENST00000292478 TSPY1Q01534 308 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 PPP6R3Q5H9R7 873 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-201ENST00000292478 RASIP1Q5U651 963 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 JCADQ9P266 1359 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 ASAP2O43150 1006 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 DGAT1O75907 488 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 NTSR2O95665 410 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 PDZD8Q8NEN9 1154 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 GCNAQ96QF7 691 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 VIPAS39Q9H9C1 493 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 SNX12Q9UMY4 172 aa13.62□□□□□ -0.23
PTCD1-201ENST00000292478 MORC2Q9Y6X9 1032 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-201ENST00000292478 M0QYV0 167 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 STXBP3O00186 592 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 HSPA4LO95757 839 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 EPHB1P54762 984 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 ZNF394Q53GI3 561 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 HIBCHQ6NVY1 386 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 FASTKD5Q7L8L6 764 aaKnown RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 ATP6V1G3Q96LB4 118 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 MYCBPQ99417 103 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 ELAC2Q9BQ52 826 aaKnown RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 HEMGNQ9BXL5 484 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 MAGEB5Q9BZ81 275 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 GMNCA6NCL1 334 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 ELF1P32519 619 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 NKX1-1Q15270 411 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 STILQ15468 1287 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 KCNB2Q92953 911 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 PPP1R16BQ96T49 567 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 SPECC1L-ADORA2AF8WAN1 911 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 CCZ1BP86790 482 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 CCZ1P86791 482 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 ITPRIPL1Q6GPH6 555 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 CCDC137Q6PK04 289 aaKnown RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 SPATA4Q8NEY3 305 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 MRPL40Q9NQ50 206 aaKnown RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 C19orf81C9J6K1 198 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 MGEA5O60502 916 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 ATP1A1P05023 1023 aaKnown RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 TMPRSS15P98073 1019 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 PDCLQ13371 301 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 XKR3Q5GH77 459 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 LRRC31Q6UY01 552 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 RHPN2Q8IUC4 686 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 GLYCTKQ8IVS8 523 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 DAGLBQ8NCG7 672 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 COG1Q8WTW3 980 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 GRAMD1AQ96CP6 724 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 ZNF560Q96MR9 790 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 RPAP3Q9H6T3 665 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 JPH1Q9HDC5 661 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 EIF3DO15371 548 aaKnown RBP eCLIP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 KCNQ2O43526 872 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 NCK2O43639 380 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 KRT14P02533 472 aa13.61□□□□□ -0.23
PTCD1-201ENST00000292478 FXR2P51116 673 aaKnown RBP eCLIP13.61□□□□□ -0.23
PTCD1-201ENST00000292478 DEUP1Q05D60 604 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms