RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 IQCEQ6IPM2 695 aa18.32■□□□□ 0.52
CPSF4-201ENST00000292476 DAW1Q8N136 415 aa18.32■□□□□ 0.52
CPSF4-201ENST00000292476 SH3TC2Q8TF17 1288 aa18.32■□□□□ 0.52
CPSF4-201ENST00000292476 SPATA33Q96N06 139 aa18.32■□□□□ 0.52
CPSF4-201ENST00000292476 GPR20Q99678 358 aa18.32■□□□□ 0.52
CPSF4-201ENST00000292476 ZNF236Q9UL36 1845 aa18.32■□□□□ 0.52
CPSF4-201ENST00000292476 LGR5O75473 907 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 PRPF6O94906 941 aaKnown RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 MYCP01106 439 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 GH1P01241 217 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 KLK7P49862 253 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 MAP2K5Q13163 448 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 DMP1Q13316 513 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 MYBPC2Q14324 1141 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 CCDC40Q4G0X9 1142 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 TRIM58Q8NG06 486 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 SPIRE2Q8WWL2 714 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 SLC7A3Q8WY07 619 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 BBXQ8WY36 941 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 RUBCNQ92622 972 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 SYN2Q92777 582 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 IFT74Q96LB3 600 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 FIZ1Q96SL8 496 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 PNKPQ96T60 521 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 TINF2Q9BSI4 451 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 FGFBP2Q9BYJ0 223 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 SMARCAD1Q9H4L7 1026 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 METTL14Q9HCE5 456 aaKnown RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 ST7Q9NRC1 585 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 TRIM10Q9UDY6 481 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 L1RE1Q9UN81 338 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 EXOC7Q9UPT5 735 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 EMSYQ7Z589 1322 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 SSU72P8A0A1W2PR75 194 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 K7ENM7 598 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 ARIH2O95376 493 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 PRLRP16471 622 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 NR2F2P24468 414 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 NMT1P30419 496 aaKnown RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 POLGP54098 1239 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 GLG1Q92896 1179 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 SECISBP2LQ93073 1101 aaKnown RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 PKNOX2Q96KN3 472 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 ACCSQ96QU6 501 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 NTPCRQ9BSD7 190 aaKnown RBP18.31■□□□□ 0.52
CPSF4-201ENST00000292476 STRA6Q9BX79 667 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 FAM184BQ9ULE4 1060 aa18.31■□□□□ 0.52
CPSF4-201ENST00000292476 SLC16A3O15427 465 aaKnown RBP18.3■□□□□ 0.52
CPSF4-201ENST00000292476 GAS2O43903 313 aaKnown RBP18.3■□□□□ 0.52
CPSF4-201ENST00000292476 SORBS3O60504 671 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 HOXC6P09630 235 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 OAS2P29728 719 aaKnown RBP18.3■□□□□ 0.52
CPSF4-201ENST00000292476 CYP2C19P33261 490 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 ITIH3Q06033 890 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
CPSF4-201ENST00000292476 MORN1Q5T089 497 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 IQSEC1Q6DN90 963 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 TAPT1Q6NXT6 567 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 MAEAQ7L5Y9 396 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 ZNF572Q7Z3I7 529 aaPredicted RBP18.3■□□□□ 0.52
CPSF4-201ENST00000292476 FRMD5Q7Z6J6 570 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 SYCP3Q8IZU3 236 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 JPH2Q9BR39 696 aaPredicted RBP18.3■□□□□ 0.52
CPSF4-201ENST00000292476 ACBD3Q9H3P7 528 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 PDLIM7Q9NR12 457 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 GJD2Q9UKL4 321 aa18.3■□□□□ 0.52
CPSF4-201ENST00000292476 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 CCDC66A2RUB6 948 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 PJA2O43164 708 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 TACC1O75410 805 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 PPP1R37O75864 691 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 ATP1A1P05023 1023 aaKnown RBP18.29■□□□□ 0.52
CPSF4-201ENST00000292476 ELNP15502 786 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 NCKAP1LP55160 1127 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 SOX10P56693 466 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 GTF2BQ00403 316 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 PPP2R5AQ15172 486 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 MTERF2Q49AM1 385 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 MAP9Q49MG5 647 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 TRMT1LQ7Z2T5 733 aaKnown RBP18.29■□□□□ 0.52
CPSF4-201ENST00000292476 NEK11Q8NG66 645 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 TMEM174Q8WUU8 243 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 LACRTQ9GZZ8 138 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 JRKLQ9Y4A0 524 aa18.29■□□□□ 0.52
CPSF4-201ENST00000292476 ADCY3O60266 1144 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 ATP4AP20648 1035 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 CYP2B6P20813 491 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 GRK4P32298 578 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 RGS2P41220 211 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 PEX3P56589 373 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 HSDL1Q3SXM5 330 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 PDXDC1Q6P996 788 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 HAUS6Q7Z4H7 955 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 PPTC7Q8NI37 304 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 BAP1Q92560 729 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 ARMC5Q96C12 935 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 MKNK1Q9BUB5 465 aa18.28■□□□□ 0.52
CPSF4-201ENST00000292476 IFIH1Q9BYX4 1025 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms