RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 TMEM169Q96HH4 297 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 IGSF21Q96ID5 467 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 PHF7Q9BWX1 381 aaPredicted RBP28.12■■■□□ 2.09
U2AF1-201ENST00000291552 ANKEF1Q9NU02 776 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 CDH22Q9UJ99 828 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 A0A087WWV3 80 aa28.11■■■□□ 2.09
U2AF1-201ENST00000291552 TSPAN1O60635 241 aa28.11■■■□□ 2.09
U2AF1-201ENST00000291552 CLASP2O75122 1294 aaKnown RBP28.11■■■□□ 2.09
U2AF1-201ENST00000291552 RARRES1P49788 294 aa28.11■■■□□ 2.09
U2AF1-201ENST00000291552 PTENP60484 403 aa28.11■■■□□ 2.09
U2AF1-201ENST00000291552 CAPSQ13938 189 aa28.11■■■□□ 2.09
U2AF1-201ENST00000291552 IFNLR1Q8IU57 520 aaPredicted RBP28.11■■■□□ 2.09
U2AF1-201ENST00000291552 SMG8Q8ND04 991 aaKnown RBP28.11■■■□□ 2.09
U2AF1-201ENST00000291552 APOL5Q9BWW9 433 aa28.11■■■□□ 2.09
U2AF1-201ENST00000291552 LIMCH1Q9UPQ0 1083 aa28.11■■■□□ 2.09
U2AF1-201ENST00000291552 HCFC2Q9Y5Z7 792 aa28.11■■■□□ 2.09
U2AF1-201ENST00000291552 EIF5BO60841 1220 aaKnown RBP28.1■■■□□ 2.09
U2AF1-201ENST00000291552 SPATA31C1P0DKV0 1188 aa28.1■■■□□ 2.09
U2AF1-201ENST00000291552 AMHR2Q16671 573 aa28.1■■■□□ 2.09
U2AF1-201ENST00000291552 VPS52Q8N1B4 723 aa28.1■■■□□ 2.09
U2AF1-201ENST00000291552 PGBD4Q96DM1 585 aa28.1■■■□□ 2.09
U2AF1-201ENST00000291552 KIF2CQ99661 725 aa28.1■■■□□ 2.09
U2AF1-201ENST00000291552 EIF2AQ9BY44 585 aaKnown RBP28.1■■■□□ 2.09
U2AF1-201ENST00000291552 GBP3Q9H0R5 595 aa28.1■■■□□ 2.09
U2AF1-201ENST00000291552 RSAD1Q9HA92 442 aa28.1■■■□□ 2.09
U2AF1-201ENST00000291552 ARIH1Q9Y4X5 557 aaPredicted RBP28.1■■■□□ 2.09
U2AF1-201ENST00000291552 DDHD2O94830 711 aa28.09■■■□□ 2.09
U2AF1-201ENST00000291552 SRGAP2BP0DMP2 458 aa28.09■■■□□ 2.09
U2AF1-201ENST00000291552 ATP2B1P20020 1258 aa28.09■■■□□ 2.09
U2AF1-201ENST00000291552 ARL2P36404 184 aa28.09■■■□□ 2.09
U2AF1-201ENST00000291552 DDX53Q86TM3 631 aaKnown RBP28.09■■■□□ 2.09
U2AF1-201ENST00000291552 PIGOQ8TEQ8 1089 aa28.09■■■□□ 2.09
U2AF1-201ENST00000291552 FAM122AQ96E09 287 aa28.09■■■□□ 2.09
U2AF1-201ENST00000291552 DENND4AQ7Z401 1863 aa28.08■■■□□ 2.09
U2AF1-201ENST00000291552 DGAT1O75907 488 aa28.08■■■□□ 2.09
U2AF1-201ENST00000291552 NCLP19338 710 aaKnown RBP28.08■■■□□ 2.09
U2AF1-201ENST00000291552 GLRA2P23416 452 aa28.08■■■□□ 2.09
U2AF1-201ENST00000291552 MCM7P33993 719 aa28.08■■■□□ 2.09
U2AF1-201ENST00000291552 RNASELQ05823 741 aaKnown RBP28.08■■■□□ 2.09
U2AF1-201ENST00000291552 MBTD1Q05BQ5 628 aa28.08■■■□□ 2.09
U2AF1-201ENST00000291552 MXD4Q14582 209 aaPredicted RBP28.08■■■□□ 2.09
U2AF1-201ENST00000291552 CPB2Q96IY4 423 aa28.08■■■□□ 2.09
U2AF1-201ENST00000291552 RPGRIP1Q96KN7 1286 aa28.08■■■□□ 2.09
U2AF1-201ENST00000291552 CNTNAP2Q9UHC6 1331 aa28.08■■■□□ 2.09
U2AF1-201ENST00000291552 MYO10Q9HD67 2058 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 ZDBF2Q9HCK1 2354 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 WDFY4Q6ZS81 3184 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.07■■■□□ 2.08
U2AF1-201ENST00000291552 CXCL14O95715 111 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 CTSAP10619 480 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 POU5F1BQ06416 359 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 URGCPQ8TCY9 931 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 CASP10Q92851 521 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 C8orf76Q96K31 380 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 LLPHQ9BRT6 129 aaKnown RBP28.07■■■□□ 2.08
U2AF1-201ENST00000291552 IPPQ9Y573 584 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 IRAK3Q9Y616 596 aa28.07■■■□□ 2.08
U2AF1-201ENST00000291552 MED24O75448 989 aa28.06■■■□□ 2.08
U2AF1-201ENST00000291552 ERLIN2O94905 339 aa28.06■■■□□ 2.08
U2AF1-201ENST00000291552 C8orf34Q49A92 452 aa28.06■■■□□ 2.08
U2AF1-201ENST00000291552 HFE2Q6ZVN8 426 aa28.06■■■□□ 2.08
U2AF1-201ENST00000291552 POLR3FQ9H1D9 316 aaPredicted RBP28.06■■■□□ 2.08
U2AF1-201ENST00000291552 RNF39Q9H2S5 420 aa28.06■■■□□ 2.08
U2AF1-201ENST00000291552 PLXNA3P51805 1871 aa28.06■■■□□ 2.08
U2AF1-201ENST00000291552 C2orf16Q68DN1 1984 aa28.06■■■□□ 2.08
U2AF1-201ENST00000291552 INO80B-WBP1J3KQ70 363 aa28.05■■■□□ 2.08
U2AF1-201ENST00000291552 USO1O60763 962 aaKnown RBP28.05■■■□□ 2.08
U2AF1-201ENST00000291552 HOXB8P17481 243 aaPredicted RBP28.05■■■□□ 2.08
U2AF1-201ENST00000291552 CA8P35219 290 aa28.05■■■□□ 2.08
U2AF1-201ENST00000291552 TFDP1Q14186 410 aa28.05■■■□□ 2.08
U2AF1-201ENST00000291552 SAFBQ15424 915 aaKnown RBP eCLIP28.05■■■□□ 2.08
U2AF1-201ENST00000291552 CATSPER3Q86XQ3 398 aa28.05■■■□□ 2.08
U2AF1-201ENST00000291552 EDAQ92838 391 aa28.05■■■□□ 2.08
U2AF1-201ENST00000291552 GPRC5CQ9NQ84 441 aa28.05■■■□□ 2.08
U2AF1-201ENST00000291552 HES2Q9Y543 173 aa28.05■■■□□ 2.08
U2AF1-201ENST00000291552 CARNS1A5YM72 827 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 INPPL1O15357 1258 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 B4GALT5O43286 388 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 POMCP01189 267 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 ARF4P18085 180 aaPredicted RBP28.04■■■□□ 2.08
U2AF1-201ENST00000291552 AXLP30530 894 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 PCBP1Q15365 356 aaKnown RBP eCLIP28.04■■■□□ 2.08
U2AF1-201ENST00000291552 PTPN14Q15678 1187 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 NOTUMQ6P988 496 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 FEZF2Q8TBJ5 459 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 CCDC51Q96ER9 411 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 NFKBIZQ9BYH8 718 aa28.04■■■□□ 2.08
U2AF1-201ENST00000291552 XRCC6P12956 609 aaKnown RBP eCLIP28.03■■■□□ 2.08
U2AF1-201ENST00000291552 ITGA4P13612 1032 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 EPCAMP16422 314 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 ZNF174Q15697 407 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 POTEGQ6S5H5 508 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 FBXO18Q8NFZ0 1043 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 SLC22A17Q8WUG5 538 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 CCDC43Q96MW1 224 aaKnown RBP28.03■■■□□ 2.08
U2AF1-201ENST00000291552 TMEM175Q9BSA9 504 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 CSRNP2Q9H175 543 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 FOXP1Q9H334 677 aaPredicted RBP28.03■■■□□ 2.08
U2AF1-201ENST00000291552 TUFT1Q9NNX1 390 aa28.03■■■□□ 2.08
U2AF1-201ENST00000291552 MARCH5Q9NX47 278 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms