RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CASD1Q96PB1 797 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 UHRF1Q96T88 793 aaPredicted RBP10.87□□□□□ -0.67
CCDC58-201ENST00000291458 HSD17B14Q9BPX1 270 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 APOL6Q9BWW8 343 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 INO80BQ9C086 356 aaPredicted RBP10.87□□□□□ -0.67
CCDC58-201ENST00000291458 TMEM117Q9H0C3 514 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 IFT122Q9HBG6 1241 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 DACT1Q9NYF0 836 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 LMCD1Q9NZU5 365 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 PLAGL2Q9UPG8 496 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 PCDHB12Q9Y5F1 795 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 ARHGEF35A5YM69 484 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 NT5C1B-RDH14C9J2C7 533 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 LINC01565O15544 149 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 HOXA2O43364 376 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 ZC3H11AO75152 810 aaKnown RBP eCLIP10.86□□□□□ -0.679e-6■■■■□ 23.7
CCDC58-201ENST00000291458 DGAT1O75907 488 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 RB1P06400 928 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 SPATA31C1P0DKV0 1188 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 CAPSQ13938 189 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 TFDP1Q14186 410 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 AAK1Q2M2I8 961 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 PLPP4Q5VZY2 271 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 HAUS3Q68CZ6 603 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 CDR2LQ86X02 465 aaPredicted RBP10.86□□□□□ -0.67
CCDC58-201ENST00000291458 CATSPER3Q86XQ3 398 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 MICAL1Q8TDZ2 1067 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 SYMPKQ92797 1274 aaKnown RBP10.86□□□□□ -0.67
CCDC58-201ENST00000291458 PLVAPQ9BX97 442 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 ELAC1Q9H777 363 aaKnown RBP10.86□□□□□ -0.67
CCDC58-201ENST00000291458 TUFT1Q9NNX1 390 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 AAASQ9NRG9 546 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 ANKEF1Q9NU02 776 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 AGPAT5Q9NUQ2 364 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 FAM105AQ9NUU6 356 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 COG5Q9UP83 839 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
CCDC58-201ENST00000291458 TDRD15B5MCY1 1934 aaKnown RBP10.86□□□□□ -0.67
CCDC58-201ENST00000291458 B4GALT5O43286 388 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 GAS2O43903 313 aaKnown RBP10.85□□□□□ -0.67
CCDC58-201ENST00000291458 FGF18O76093 207 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 LYPLA2O95372 231 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 LAG3P18627 525 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 GLRA2P23416 452 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 U2AF2P26368 475 aaKnown RBP eCLIP10.85□□□□□ -0.671e-7■□□□□ 10.1
CCDC58-201ENST00000291458 CDC25AP30304 524 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 NRIP1P48552 1158 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 TRAPPC10P48553 1259 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 MCM2P49736 904 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 CDC42EP1Q00587 391 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 RNASELQ05823 741 aaKnown RBP10.85□□□□□ -0.67
CCDC58-201ENST00000291458 HYAL1Q12794 435 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 ECM1Q16610 540 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 LRRC55Q6ZSA7 311 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 SRGAP1Q7Z6B7 1085 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 EXOC8Q8IYI6 725 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 SPPL3Q8TCT6 385 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 ZNF558Q96NG5 402 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 PLIN2Q99541 437 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 KIFC3Q9BVG8 833 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 EIF2AQ9BY44 585 aaKnown RBP10.85□□□□□ -0.67
CCDC58-201ENST00000291458 LMAN2LQ9H0V9 348 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 CWH43Q9H720 699 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 ENTPD7Q9NQZ7 604 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 DDX19AQ9NUU7 478 aaKnown RBP10.85□□□□□ -0.67
CCDC58-201ENST00000291458 LRWD1Q9UFC0 647 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 PPME1Q9Y570 386 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.85□□□□□ -0.67
CCDC58-201ENST00000291458 PCDHB2Q9Y5E7 798 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 PRUNE2Q8WUY3 3088 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 MYH11P35749 1972 aa10.85□□□□□ -0.67
CCDC58-201ENST00000291458 A0A0U1RQF3 1178 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 VWA3AA6NCI4 1184 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 PER2O15055 1255 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 TSPAN1O60635 241 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 NPTXRO95502 500 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 SSBP05455 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
CCDC58-201ENST00000291458 IL9P15248 144 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 NDUFV1P49821 464 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 FAM189BP81408 668 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 RBM10P98175 930 aaKnown RBP10.84□□□□□ -0.67
CCDC58-201ENST00000291458 MBTD1Q05BQ5 628 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 ORC2Q13416 577 aaPredicted RBP10.84□□□□□ -0.67
CCDC58-201ENST00000291458 CAMK1Q14012 370 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 LARP1BQ659C4 914 aaKnown RBP10.84□□□□□ -0.67
CCDC58-201ENST00000291458 GLB1LQ6UWU2 654 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
CCDC58-201ENST00000291458 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 SPNS2Q8IVW8 549 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 C4orf32Q8N8J7 132 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 BSNDQ8WZ55 320 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 P2RX5Q93086 422 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 NACC1Q96RE7 527 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 POLR3CQ9BUI4 534 aaPredicted RBP10.84□□□□□ -0.67
CCDC58-201ENST00000291458 BACH2Q9BYV9 841 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 BHMT2Q9H2M3 363 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 TLR9Q9NR96 1032 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms