RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CST3P01034 146 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 LPLP06858 475 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 GSTM1P09488 218 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 PIK3CAP42336 1068 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 PPARAQ07869 468 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 CDC37Q16543 378 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 NKG7Q16617 165 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ZACNQ401N2 412 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 CPZQ66K79 652 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 SLC30A6Q6NXT4 461 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 CYFIP1Q7L576 1253 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 UBE2Q1Q7Z7E8 422 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 SPC24Q8NBT2 197 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 CALML6Q8TD86 181 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 RAX2Q96IS3 184 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ZMAT2Q96NC0 199 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 BAG1Q99933 345 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 LSM14BQ9BX40 385 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 KCTD10Q9H3F6 313 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 MTRRQ9UBK8 725 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 PCDHGA8Q9Y5G5 932 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 SETD1BQ9UPS6 1966 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 TSPAN9O75954 239 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 AKR1B1P15121 316 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 YY1P25490 414 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 PRPHP41219 470 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 TNNT3P45378 269 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 TPD52P55327 224 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 ALDH6A1Q02252 535 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 TNP2Q05952 138 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 WASHC5Q12768 1159 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 CNN3Q15417 329 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 SLC14A2Q15849 920 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ZC3H12AQ5D1E8 599 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 MRPL14Q6P1L8 145 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 DNAJB7Q7Z6W7 309 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 CMIPQ8IY22 773 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 NUP93Q8N1F7 819 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 PPP1R14CQ8TAE6 165 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 TBC1D23Q9NUY8 699 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 CCDC39Q9UFE4 941 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ANAPC5Q9UJX4 755 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 FHOD1Q9Y613 1164 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 PRR36Q9H6K5 1346 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 THAP12O43422 761 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 HNRNPCP07910 306 aaKnown RBP eCLIP3.07□□□□□ -1.921e-5■■■□□ 15.5
CHD1-201ENST00000284049 RAB6AP20340 208 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 LTKP29376 864 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 GJA4P35212 333 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 SH3BGRP55822 239 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 MPP1Q00013 466 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 COG2Q14746 738 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 IFFO2Q5TF58 517 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 TMEM192Q8IY95 271 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 CEP57L1Q8IYX8 460 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ADGRG2Q8IZP9 1017 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 PCYOX1LQ8NBM8 494 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 C3orf49Q96BT1 292 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 SLC30A3Q99726 388 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 CNPPD1Q9BV87 410 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 TTLL2Q9BWV7 592 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 GPRC5CQ9NQ84 441 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ARHGEF3Q9NR81 526 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 DBR1Q9UK59 544 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 DSEQ9UL01 958 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 TMCC3Q9ULS5 477 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 NSFL1CQ9UNZ2 370 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 SOS1Q07889 1333 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 DAPK1P53355 1430 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 LOC100289279A0A1B0GTE1 492 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 GTPBP1O00178 669 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 HNRNPDLO14979 420 aaKnown RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 TBX1O43435 398 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 DGKIO75912 1065 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 SRGNP10124 158 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ATP1A3P13637 1013 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 TYRP1P17643 537 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 KIF5BP33176 963 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ALDH5A1P51649 535 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 CHAF1BQ13112 559 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ANKRD39Q53RE8 183 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 FAM129CQ86XR2 697 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 GLB1L2Q8IW92 636 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 ACE2Q9BYF1 805 aaPredicted RBP3.07□□□□□ -1.92
CHD1-201ENST00000284049 ATP6V0A4Q9HBG4 840 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 STAP2Q9UGK3 403 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 HRH3Q9Y5N1 445 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 UHRF1BP1Q6BDS2 1440 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 MYOM2P54296 1465 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 DIP2AQ14689 1571 aa3.07□□□□□ -1.92
CHD1-201ENST00000284049 LINC01387J3KSC0 135 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 THP07101 528 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GNAI3P08754 354 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 NCAM1P13591 858 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PLS3P13797 630 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PDCP20941 246 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GRK3P35626 688 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GNAI1P63096 354 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 MXRA7P84157 204 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms