RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CAPN6Q9Y6Q1 641 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ARID2Q68CP9 1835 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 LOC102724159A0A0B4J2E5 919 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 POTEJP0CG39 1038 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 CYP2C8P10632 490 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 PRLRP16471 622 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 SCP2P22307 547 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 RFX1P22670 979 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 TCF7P36402 384 aaPredicted RBP10.42□□□□□ -0.74
TRIM55-201ENST00000276573 RFC5P40937 340 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 GCLMP48507 274 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 PWP2Q15269 919 aaKnown RBP10.42□□□□□ -0.74
TRIM55-201ENST00000276573 SNRNP35Q16560 246 aaKnown RBP10.42□□□□□ -0.74
TRIM55-201ENST00000276573 KIAA0753Q2KHM9 967 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 CELF3Q5SZQ8 465 aaKnown RBP10.42□□□□□ -0.74
TRIM55-201ENST00000276573 TMC2Q8TDI7 906 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 PARD3BQ8TEW8 1205 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 GTF3C2Q8WUA4 911 aaPredicted RBP10.42□□□□□ -0.74
TRIM55-201ENST00000276573 VTI1AQ96AJ9 217 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 SAAL1Q96ER3 474 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 NOX5Q96PH1 765 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 GPR88Q9GZN0 384 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 EPC1Q9H2F5 836 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 ZNF408Q9H9D4 720 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 NAGPAQ9UK23 515 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
TRIM55-201ENST00000276573 MYH9P35579 1960 aaKnown RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 CTAGE15A4D2H0 777 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 BTNL10A8MVZ5 291 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 F8VZ95 297 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 EVI5O60447 810 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 SRGAP2O75044 1071 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 LGR5O75473 907 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 CTAGE8P0CG41 777 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 PNMA6AP0CW24 399 aaPredicted RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 GLRA2P23416 452 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 ARHGAP44Q17R89 818 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 ALKBH5Q6P6C2 394 aaKnown RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 CCDC62Q6P9F0 684 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 CTAGE6Q86UF2 777 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 FMNL3Q8IVF7 1028 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 CTAGE4Q8IX94 777 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 ASAP3Q8TDY4 903 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 SLC7A3Q8WY07 619 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 POMGNT1Q8WZA1 660 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 MS4A4AQ96JQ5 239 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 ALS2CR12Q96Q35 445 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 GPR20Q99678 358 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 PACSIN1Q9BY11 444 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 TMEM117Q9H0C3 514 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 EFCC1Q9HA90 598 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 UBE2TQ9NPD8 197 aaPredicted RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 NENFQ9UMX5 172 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 FOXN3O00409 490 aaPredicted RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 DDX3XO00571 662 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 BUB1O43683 1085 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 MAFO75444 373 aaPredicted RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 CCDC172P0C7W6 258 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 CETPP11597 493 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 ZSCAN20P17040 1043 aaPredicted RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 KLRC1P26715 233 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 NAMPTP43490 491 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 ENPEPQ07075 957 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 CYP24A1Q07973 514 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 BMS1Q14692 1282 aaKnown RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 VPS36Q86VN1 386 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 DHX37Q8IY37 1157 aaKnown RBP10.41□□□□□ -0.74
TRIM55-201ENST00000276573 GPD1LQ8N335 351 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 GPRC5AQ8NFJ5 357 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 SLC30A5Q8TAD4 765 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 BICD1Q96G01 975 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 AZI2Q9H6S1 392 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 SNX12Q9UMY4 172 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 SLC45A1Q9Y2W3 748 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 PPME1Q9Y570 386 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 STYXL1Q9Y6J8 313 aa10.41□□□□□ -0.74
TRIM55-201ENST00000276573 ASB14A6NK59 587 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 LRRIQ3A6PVS8 624 aaPredicted RBP10.4□□□□□ -0.74
TRIM55-201ENST00000276573 K7ERI5 159 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 PDHXO00330 501 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 HNRNPDLO14979 420 aaKnown RBP10.4□□□□□ -0.74
TRIM55-201ENST00000276573 LRRN2O75325 713 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 MXI1P50539 228 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 GTF2A2P52657 109 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 NAP1L1P55209 391 aaKnown RBP10.4□□□□□ -0.74
TRIM55-201ENST00000276573 STRN3Q13033 797 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 KIF22Q14807 665 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 HSDL1Q3SXM5 330 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 PLPPR4Q7Z2D5 763 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 ARHGEF19Q8IW93 802 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 OLIG1Q8TAK6 271 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 DEPTORQ8TB45 409 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
TRIM55-201ENST00000276573 CCDC127Q96BQ5 260 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 FAM167AQ96KS9 214 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 MMS19Q96T76 1030 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 POP1Q99575 1024 aaKnown RBP10.4□□□□□ -0.74
TRIM55-201ENST00000276573 SYT11Q9BT88 431 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 PARD6BQ9BYG5 372 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms