RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 NAA15Q9BXJ9 866 aaKnown RBP15.4■□□□□ 0.06
SS18-201ENST00000269137 NFKBIZQ9BYH8 718 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 CCDC113Q9H0I3 377 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 SRRDQ9UH36 339 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 HAS3O00219 553 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 GNRH1P01148 92 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 KRT13P13646 458 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 TMOD1P28289 359 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 KRT9P35527 623 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 LIG4P49917 911 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 CLCN3P51790 818 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 NKX3-2P78367 333 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 ENPEPQ07075 957 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 BFSP1Q12934 665 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
SS18-201ENST00000269137 DCAF17Q5H9S7 520 aaPredicted RBP15.4■□□□□ 0.06
SS18-201ENST00000269137 MARCH8Q5T0T0 291 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 SLFN12LQ6IEE8 588 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 ZPBP2Q6X784 338 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 RHPN2Q8IUC4 686 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 CCDC155Q8N6L0 562 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 POMGNT1Q8WZA1 660 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 BICD1Q96G01 975 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 THSD7BQ9C0I4 1608 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 GPR25O00155 361 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 SEPT4O43236 478 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 KPNA6O60684 536 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 SRGAP2CP0DJJ0 459 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 GJA9P57773 515 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 PTENP60484 403 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 ZBED6P86452 979 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 HSP90AA2PQ14568 343 aaPredicted RBP15.39■□□□□ 0.05
SS18-201ENST00000269137 KIAA0753Q2KHM9 967 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 IFNLR1Q8IU57 520 aaPredicted RBP15.39■□□□□ 0.05
SS18-201ENST00000269137 OR8K1Q8NGG5 319 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 DNAJC7Q99615 494 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 UPF3AQ9H1J1 476 aaKnown RBP15.39■□□□□ 0.05
SS18-201ENST00000269137 MMRN2Q9H8L6 949 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 ABHD10Q9NUJ1 306 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 NRCAMQ92823 1304 aa15.39■□□□□ 0.05
SS18-201ENST00000269137 ARHGAP6O43182 974 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 MSCO60682 206 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 CACNB2Q08289 660 aaPredicted RBP15.38■□□□□ 0.05
SS18-201ENST00000269137 MFSD10Q14728 455 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 SNRNP35Q16560 246 aaKnown RBP15.38■□□□□ 0.05
SS18-201ENST00000269137 MAPK6Q16659 721 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 ZNF397Q8NF99 534 aaPredicted RBP15.38■□□□□ 0.05
SS18-201ENST00000269137 NEK11Q8NG66 645 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 CD99L2Q8TCZ2 262 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 ZBTB10Q96DT7 871 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 KIAA1586Q9HCI6 787 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 KCND1Q9NSA2 647 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 FAM207AQ9NSI2 230 aaPredicted RBP15.38■□□□□ 0.05
SS18-201ENST00000269137 SPTLC3Q9NUV7 552 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 SMIM10L2AP0DMW4 78 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 SMIM10L2BP0DMW5 78 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 PSEN2P49810 448 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 VAMP7P51809 220 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 IRX5P78411 483 aaPredicted RBP15.38■□□□□ 0.05
SS18-201ENST00000269137 GBP6Q6ZN66 633 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 GPD1LQ8N335 351 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 RDH13Q8NBN7 331 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 ZSWIM2Q8NEG5 633 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 MFSD14AQ96MC6 490 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 KATNAL1Q9BW62 490 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 TARS2Q9BW92 718 aaKnown RBP15.38■□□□□ 0.05
SS18-201ENST00000269137 MRPL4Q9BYD3 311 aaKnown RBP15.38■□□□□ 0.05
SS18-201ENST00000269137 FZD8Q9H461 694 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 PLCB1Q9NQ66 1216 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 AGPAT5Q9NUQ2 364 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 SAGE1Q9NXZ1 904 aa15.38■□□□□ 0.05
SS18-201ENST00000269137 MBLAC1A4D2B0 266 aaPredicted RBP15.37■□□□□ 0.05
SS18-201ENST00000269137 EPHB6O15197 1021 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 PMM2O15305 246 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 EXTL3O43909 919 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 NOL4O94818 638 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 ADRB2P07550 413 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 GJB1P08034 283 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 MYL3P08590 195 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 FMO5P49326 533 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 BEX3Q00994 111 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 NOLC1Q14978 699 aaKnown RBP eCLIP15.37■□□□□ 0.05
SS18-201ENST00000269137 EXOC3L4Q17RC7 722 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 CBWD2Q8IUF1 395 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 KIAA0319LQ8IZA0 1049 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 TMC2Q8TDI7 906 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 LMBR1Q8WVP7 490 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 MAP7D2Q96T17 732 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 CRACR2AQ9BSW2 395 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 SETD4Q9NVD3 440 aa15.37■□□□□ 0.05
SS18-201ENST00000269137 A0A0B4J269 797 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 GOLGA8IPA6NC78 632 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 GOLGA8JA6NMD2 632 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 ACKR2O00590 384 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 P4HA2O15460 535 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 EDN1P05305 212 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 PRKCBP05771 671 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 RARBP10826 455 aa15.36■□□□□ 0.05
SS18-201ENST00000269137 HNRNPH3P31942 346 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms