RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 TNIP2Q8NFZ5 429 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 MRPL48Q96GC5 212 aaKnown RBP17.49■□□□□ 0.39
USP13-201ENST00000263966 BRIP1Q9BX63 1249 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 DPP7Q9UHL4 492 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 MAD2L2Q9UI95 211 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 SPAG7O75391 227 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 L3MBTL3Q96JM7 780 aaPredicted RBP17.49■□□□□ 0.39
USP13-201ENST00000263966 PJA2O43164 708 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 C21orf2O43822 256 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 NHEJ1Q9H9Q4 299 aaPredicted RBP17.49■□□□□ 0.39
USP13-201ENST00000263966 MYH9P35579 1960 aaKnown RBP17.49■□□□□ 0.39
USP13-201ENST00000263966 BBS9Q3SYG4 887 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 ZNF512Q96ME7 567 aaPredicted RBP17.49■□□□□ 0.39
USP13-201ENST00000263966 DMAP1Q9NPF5 467 aaPredicted RBP17.49■□□□□ 0.39
USP13-201ENST00000263966 H0Y626 953 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 TK2O00142 265 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 TRIM16O95361 564 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 ZNF157P51786 506 aaPredicted RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 ZNF658Q5TYW1 1059 aaPredicted RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 ENTPD7Q9NQZ7 604 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 SLC16A2P36021 539 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 RWDD2BP57060 319 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 TRIM72Q6ZMU5 477 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 MLNP12872 115 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 LGR6Q9HBX8 967 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 PHKG2P15735 406 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 DR1Q01658 176 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 CCDC90BQ9GZT6 254 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 GINM1Q9NU53 330 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 ADAM22Q9P0K1 906 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 H0YC42 278 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 PSMA4P25789 261 aaKnown RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 CHRNA3P32297 505 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 TRIP4Q15650 581 aaPredicted RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 ZKSCAN8Q15776 578 aaPredicted RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 CCDC184Q52MB2 194 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 TMEM245Q9H330 911 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 ERVK-10P10266 1014 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 BRD2P25440 801 aaKnown RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 RGS4P49798 205 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 MRPS15P82914 257 aaKnown RBP17.48■□□□□ 0.39
USP13-201ENST00000263966 RNF180Q86T96 592 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 PHACTR3Q96KR7 559 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 MYOM2P54296 1465 aa17.48■□□□□ 0.39
USP13-201ENST00000263966 TOMM70O94826 608 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 KCNA2P16389 499 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 KRT20P35900 424 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 EPHB4P54760 987 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 TMED1Q13445 227 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 ANKRD40Q6AI12 368 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.47■□□□□ 0.39
USP13-201ENST00000263966 RLBP1P12271 317 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 HARS2P49590 506 aaKnown RBP17.47■□□□□ 0.39
USP13-201ENST00000263966 TSPAN17Q96FV3 270 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 SNAPC2Q13487 334 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 KIF12Q96FN5 646 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 HDAC6Q9UBN7 1215 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 TSR3Q9UJK0 312 aaKnown RBP17.47■□□□□ 0.39
USP13-201ENST00000263966 PLEKHG2Q9H7P9 1386 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 EIF4E1BA6NMX2 242 aaKnown RBP17.47■□□□□ 0.39
USP13-201ENST00000263966 JAK2O60674 1132 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 RNF135Q8IUD6 432 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 SYNMO15061 1565 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 WDR91A4D1P6 747 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 STAT3P40763 770 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 THNSL1Q8IYQ7 743 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 BCAS4Q8TDM0 211 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 BTBD6Q96KE9 485 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 ZMYND12Q9H0C1 365 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 MRGBPQ9NV56 204 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 FAM107AO95990 144 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 AP3M2P53677 418 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 ANKRD49Q8WVL7 239 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 SPON1Q9HCB6 807 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 MTFR1Q15390 333 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 KLHL38Q2WGJ6 581 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 HS6ST3Q8IZP7 471 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 OTUD5Q96G74 571 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 USP19O94966 1318 aa17.47■□□□□ 0.39
USP13-201ENST00000263966 ZRANB2O95218 330 aaKnown RBP eCLIP17.46■□□□□ 0.39
USP13-201ENST00000263966 NPY2RP49146 381 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 ALDH7A1P49419 539 aaKnown RBP17.46■□□□□ 0.39
USP13-201ENST00000263966 PDAP1Q13442 181 aaKnown RBP17.46■□□□□ 0.39
USP13-201ENST00000263966 TSPYL6Q8N831 410 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 XPO6Q96QU8 1125 aaKnown RBP17.46■□□□□ 0.39
USP13-201ENST00000263966 SIK2Q9H0K1 926 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 GREM2Q9H772 168 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.39
USP13-201ENST00000263966 KCNH2Q12809 1159 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 ZNF555Q8NEP9 628 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 EMILIN3Q9NT22 766 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 ANAPC7Q9UJX3 599 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 DPF3Q92784 378 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 SMARCAL1Q9NZC9 954 aa17.46■□□□□ 0.39
USP13-201ENST00000263966 HPGDP15428 266 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms