RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SESTD1Q86VW0 696 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 CDR2LQ86X02 465 aaPredicted RBP10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 MAP4K3Q8IVH8 894 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 BICD1Q96G01 975 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 ZBTB45Q96K62 511 aaPredicted RBP10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 SCLT1Q96NL6 688 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 OSMRQ99650 979 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 TSG101Q99816 390 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 OSBPL7Q9BZF2 842 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 INO80BQ9C086 356 aaPredicted RBP10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 CRISPLD2Q9H0B8 497 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 CCDC113Q9H0I3 377 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 GBP3Q9H0R5 595 aa10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 TYW1Q9NV66 732 aaKnown RBP10.69□□□□□ -0.7
SNRNP40-201ENST00000263694 UBE4BO95155 1302 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 A0A0U1RQG5 324 aaPredicted RBP10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 B4GALT5O43286 388 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 B4GALT4O60513 344 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 CTSHP09668 335 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 ZNF18P17022 549 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 CASP4P49662 377 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 CYP2J2P51589 502 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 MBTD1Q05BQ5 628 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 LRRC63Q05C16 580 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 STRN3Q13033 797 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 ADAM9Q13443 819 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 ALCAMQ13740 583 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 LRRC55Q6ZSA7 311 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 SERINC5Q86VE9 423 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 SLC43A3Q8NBI5 491 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 SLC17A8Q8NDX2 589 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 TMEM40Q8WWA1 233 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 DHX38Q92620 1227 aaKnown RBP10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 CBWD1Q9BRT8 395 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 TARS2Q9BW92 718 aaKnown RBP10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 HAPLN2Q9GZV7 340 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 TMEM134Q9H6X4 195 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 PRDM10Q9NQV6 1147 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 AGPAT3Q9NRZ7 376 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 TRAF3IP3Q9Y228 551 aa10.68□□□□□ -0.7
SNRNP40-201ENST00000263694 GOLGA8IPA6NC78 632 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 GOLGA8JA6NMD2 632 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 ARVCFO00192 962 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 CALUO43852 315 aaPredicted RBP10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 NR3C1P04150 777 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 PRKCBP05771 671 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 CDK11BP21127 795 aaKnown RBP10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 NR2F2P24468 414 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 ADSSP30520 456 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 THPOP40225 353 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 PHKA2P46019 1235 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 MRE11P49959 708 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 CDK7P50613 346 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 EFNA5P52803 228 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 PTPN21Q16825 1174 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 UVSSAQ2YD98 709 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 CDKAL1Q5VV42 579 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 ZBTB8OSQ8IWT0 167 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 RDH13Q8NBN7 331 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 NOC3LQ8WTT2 800 aaKnown RBP10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 CPB2Q96IY4 423 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 FZD8Q9H461 694 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 TMEM206Q9H813 350 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 KCNG1Q9UIX4 513 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 NOD1Q9Y239 953 aa10.67□□□□□ -0.7
SNRNP40-201ENST00000263694 KCNJ18B7U540 433 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 H0YCG3 227 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 TULP1O00294 542 aaPredicted RBP10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 HNRNPDLO14979 420 aaKnown RBP10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 CHRNA1P02708 482 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 GJA8P48165 433 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 LIG4P49917 911 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 MRPS6P82932 125 aaKnown RBP10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 FANCCQ00597 558 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 FKBP3Q00688 224 aaKnown RBP10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 KCNJ12Q14500 433 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 MAPK6Q16659 721 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 EDRF1Q3B7T1 1238 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 EEF1DP3Q658K8 133 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 CEP135Q66GS9 1140 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 TAF2Q6P1X5 1199 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 HS2ST1Q7LGA3 356 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 ZBTB33Q86T24 672 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 HVCN1Q96D96 273 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 SAAL1Q96ER3 474 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 ACO2Q99798 780 aaKnown RBP10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 C2orf40Q9H1Z8 148 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 EXOC7Q9UPT5 735 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 CDY2AQ9Y6F7 541 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 PHLPP2Q6ZVD8 1323 aa10.66□□□□□ -0.7
SNRNP40-201ENST00000263694 AKAP3O75969 853 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 HARSP12081 509 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 DARSP14868 501 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 MATR3P43243 847 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 TPM4P67936 248 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 PTPN11Q06124 597 aaPredicted RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 POU5F1BQ06416 359 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 PTK7Q13308 1070 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 PRPF4BQ13523 1007 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 SNX17Q15036 470 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms