RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SIP14410 1827 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 KRT86O43790 486 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 SLU7O95391 586 aaKnown RBP17.2■□□□□ 0.34
VPS26A-201ENST00000263559 SNAI1O95863 264 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-201ENST00000263559 ABCD1P33897 745 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 GCLMP48507 274 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 JAM2P57087 298 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 KLHL30Q0D2K2 578 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 PLEKHH3Q7Z736 793 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 RASAL3Q86YV0 1011 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 LMO3Q8TAP4 145 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
VPS26A-201ENST00000263559 KATNBL1Q9H079 304 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 SMARCAD1Q9H4L7 1026 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 MYO6Q9UM54 1294 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 DUSP10Q9Y6W6 482 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 MCCD1P59942 119 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-201ENST00000263559 EHBP1Q8NDI1 1231 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 KCNN1Q92952 543 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 FBXL18Q96ME1 805 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 CPA4Q9UI42 421 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 PPME1Q9Y570 386 aa17.2■□□□□ 0.34
VPS26A-201ENST00000263559 RBM47A0AV96 593 aaKnown RBP17.19■□□□□ 0.34
VPS26A-201ENST00000263559 K7ERI5 159 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 IGF2BP3O00425 579 aaKnown RBP eCLIP17.19■□□□□ 0.34
VPS26A-201ENST00000263559 GARTP22102 1010 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 MAPK4P31152 587 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 ADCYAP1R1P41586 468 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 STRN3Q13033 797 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 LAMC2Q13753 1193 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 CAPSQ13938 189 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 PRPF31Q8WWY3 499 aaKnown RBP17.19■□□□□ 0.34
VPS26A-201ENST00000263559 MAML3Q96JK9 1138 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 SUGCTQ9HAC7 445 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 ECM2O94769 699 aaPredicted RBP17.19■□□□□ 0.34
VPS26A-201ENST00000263559 LIG4P49917 911 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 KIF5AQ12840 1032 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
VPS26A-201ENST00000263559 DNAJC12Q9UKB3 198 aa17.19■□□□□ 0.34
VPS26A-201ENST00000263559 DOCK3Q8IZD9 2030 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 TULP1O00294 542 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-201ENST00000263559 MAGEA1P43355 309 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 SLC26A2P50443 739 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 NAA30Q147X3 362 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-201ENST00000263559 GPD1LQ8N335 351 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 PARD3BQ8TEW8 1205 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 CCDC127Q96BQ5 260 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 MFSD14AQ96MC6 490 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 APEX2Q9UBZ4 518 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 IGKV6-21A0A0C4DH24 114 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-201ENST00000263559 RBAK-RBAKDNI3L0D1 243 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 P4HA2O15460 535 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
VPS26A-201ENST00000263559 LRRN2O75325 713 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 GH1P01241 217 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 PNMA6AP0CW24 399 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-201ENST00000263559 IER5Q5VY09 327 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 PHLDB3Q6NSJ2 640 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 LRRN4CLQ8ND94 238 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 NPLOC4Q8TAT6 608 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 TRAPPC12Q8WVT3 735 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 POP1Q99575 1024 aaKnown RBP17.18■□□□□ 0.34
VPS26A-201ENST00000263559 TMEM117Q9H0C3 514 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 RNPEPQ9H4A4 650 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 TRPC6Q9Y210 931 aa17.18■□□□□ 0.34
VPS26A-201ENST00000263559 SCP2P22307 547 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 PTK2Q05397 1052 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 EPC2Q52LR7 807 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 LRRC71Q8N4P6 559 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.17■□□□□ 0.34
VPS26A-201ENST00000263559 STK33Q9BYT3 514 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 ADAMTS1Q9UHI8 967 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 MRFAP1Q9Y605 127 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 A0A087X0T9 212 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 CTAGE9A4FU28 777 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 LRRIQ3A6PVS8 624 aaPredicted RBP17.17■□□□□ 0.34
VPS26A-201ENST00000263559 ADCY3O60266 1144 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 EDN1P05305 212 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 FAM228BP0C875 321 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 CETN1Q12798 172 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 SLC18A3Q16572 532 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 ZNF571Q7Z3V5 609 aaPredicted RBP17.17■□□□□ 0.34
VPS26A-201ENST00000263559 FAM213AQ9BRX8 229 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 TINF2Q9BSI4 451 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 TSGA10Q9BZW7 698 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 TMEM134Q9H6X4 195 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 STYXL1Q9Y6J8 313 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 EVPLQ92817 2033 aa17.17■□□□□ 0.34
VPS26A-201ENST00000263559 SLC15A5A6NIM6 579 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 HBP1O60381 514 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 PIGRP01833 764 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 PRKCIP41743 596 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 STAT1P42224 750 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 MXI1P50539 228 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 CYP24A1Q07973 514 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 DRAP1Q14919 205 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-201ENST00000263559 SAPCD2Q86UD0 394 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 EXOC8Q8IYI6 725 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 TCP11Q8WWU5 503 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms