RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CCDC113Q9H0I3 377 aa30.16■■■□□ 2.42
SMARCD3-201ENST00000262188 B4GALT5O43286 388 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 CCNE1P24864 410 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 MBTD1Q05BQ5 628 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 TRIM60Q495X7 471 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 CENPPQ6IPU0 288 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 SYCP3Q8IZU3 236 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 NAT10Q9H0A0 1025 aaKnown RBP30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 TSPYL1Q9H0U9 437 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 C11orf49Q9H6J7 331 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 CDY2AQ9Y6F7 541 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 CLIC2O15247 247 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 PHKA2P46019 1235 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 PTK7Q13308 1070 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 NCAPHQ15003 741 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 TRIM71Q2Q1W2 868 aaKnown RBP30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 TTI2Q6NXR4 508 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 ZBTB8OSQ8IWT0 167 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 ANKLE1Q8NAG6 615 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 ACCSQ96QU6 501 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 DUSP9Q99956 384 aaKnown RBP30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 RWDD2AQ9UIY3 292 aa30.15■■■□□ 2.42
SMARCD3-201ENST00000262188 CCDC66A2RUB6 948 aa30.14■■■□□ 2.42
SMARCD3-201ENST00000262188 ANKRD63C9JTQ0 380 aa30.14■■■□□ 2.42
SMARCD3-201ENST00000262188 CHRNA1P02708 482 aa30.14■■■□□ 2.42
SMARCD3-201ENST00000262188 BRD2P25440 801 aaKnown RBP30.14■■■□□ 2.42
SMARCD3-201ENST00000262188 MRPS6P82932 125 aaKnown RBP30.14■■■□□ 2.42
SMARCD3-201ENST00000262188 CBX1P83916 185 aa30.14■■■□□ 2.42
SMARCD3-201ENST00000262188 STXBP4Q6ZWJ1 553 aa30.14■■■□□ 2.42
SMARCD3-201ENST00000262188 MAP4K3Q8IVH8 894 aa30.14■■■□□ 2.42
SMARCD3-201ENST00000262188 ERCC5P28715 1186 aaPredicted RBP30.14■■■□□ 2.41
SMARCD3-201ENST00000262188 ZCWPW2Q504Y3 356 aa30.14■■■□□ 2.41
SMARCD3-201ENST00000262188 SLC39A4Q6P5W5 647 aa30.14■■■□□ 2.41
SMARCD3-201ENST00000262188 CDR2LQ86X02 465 aaPredicted RBP30.14■■■□□ 2.41
SMARCD3-201ENST00000262188 SIP14410 1827 aa30.13■■■□□ 2.41
SMARCD3-201ENST00000262188 PRKCBP05771 671 aa30.13■■■□□ 2.41
SMARCD3-201ENST00000262188 TARS2Q9BW92 718 aaKnown RBP30.13■■■□□ 2.41
SMARCD3-201ENST00000262188 PHLPP2Q6ZVD8 1323 aa30.13■■■□□ 2.41
SMARCD3-201ENST00000262188 LRRC26Q2I0M4 334 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 ZNF410Q86VK4 478 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 SLC17A8Q8NDX2 589 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 BICD1Q96G01 975 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 CELF4Q9BZC1 486 aaKnown RBP30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 ATP11BQ9Y2G3 1177 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 CD4P01730 458 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 TLE2Q04725 743 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 STRN3Q13033 797 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 ALCAMQ13740 583 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 ZNF618Q5T7W0 954 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 NME8Q8N427 588 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 ZSWIM2Q8NEG5 633 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 ZBTB45Q96K62 511 aaPredicted RBP30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 BPIFA3Q9BQP9 254 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 C2orf40Q9H1Z8 148 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 TMEM134Q9H6X4 195 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 SAMSN1Q9NSI8 373 aaKnown RBP30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 NFE2L3Q9Y4A8 694 aa30.12■■■□□ 2.41
SMARCD3-201ENST00000262188 UBE4BO95155 1302 aa30.11■■■□□ 2.41
SMARCD3-201ENST00000262188 FAM193AP78312 1265 aa30.11■■■□□ 2.41
SMARCD3-201ENST00000262188 MYL5Q02045 173 aa30.11■■■□□ 2.41
SMARCD3-201ENST00000262188 SNX17Q15036 470 aa30.11■■■□□ 2.41
SMARCD3-201ENST00000262188 MAPK6Q16659 721 aa30.11■■■□□ 2.41
SMARCD3-201ENST00000262188 GBP3Q9H0R5 595 aa30.11■■■□□ 2.41
SMARCD3-201ENST00000262188 HSD3B7Q9H2F3 369 aa30.11■■■□□ 2.41
SMARCD3-201ENST00000262188 FANCLQ9NW38 375 aa30.11■■■□□ 2.41
SMARCD3-201ENST00000262188 HNRNPDLO14979 420 aaKnown RBP30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 EFNA5P52803 228 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 MGAT3Q09327 533 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 AMHR2Q16671 573 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 RSPH3Q86UC2 560 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 ZNF710Q8N1W2 664 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 CPB2Q96IY4 423 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 GCOM2Q9BZD3 368 aaPredicted RBP30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 FZD8Q9H461 694 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 PCIF1Q9H4Z3 704 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 AGPAT3Q9NRZ7 376 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 TYW1Q9NV66 732 aaKnown RBP30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 KCNG1Q9UIX4 513 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 TRPV2Q9Y5S1 764 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 BECN2A8MW95 431 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 H0YCG3 227 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 CKBP12277 381 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 DARSP14868 501 aaKnown RBP30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 IFNLR1Q8IU57 520 aaPredicted RBP30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 ENOX1Q8TC92 643 aaKnown RBP30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 CBWD1Q9BRT8 395 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 NFKBIZQ9BYH8 718 aa30.1■■■□□ 2.41
SMARCD3-201ENST00000262188 UMODL1Q5DID0 1318 aa30.09■■■□□ 2.41
SMARCD3-201ENST00000262188 PPP1R2P41236 205 aa30.09■■■□□ 2.41
SMARCD3-201ENST00000262188 POU5F1BQ06416 359 aa30.09■■■□□ 2.41
SMARCD3-201ENST00000262188 NECAB2Q7Z6G3 386 aa30.09■■■□□ 2.41
SMARCD3-201ENST00000262188 HVCN1Q96D96 273 aa30.09■■■□□ 2.41
SMARCD3-201ENST00000262188 TMEM206Q9H813 350 aa30.09■■■□□ 2.41
SMARCD3-201ENST00000262188 EIF4BP23588 611 aaKnown RBP30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 ADSSP30520 456 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 CRYBB1P53674 252 aaPredicted RBP30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 FAAP100Q0VG06 881 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 CSGALNACT2Q8N6G5 542 aa30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 SRRTQ9BXP5 876 aaKnown RBP30.08■■■□□ 2.41
SMARCD3-201ENST00000262188 HAPLN2Q9GZV7 340 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms