RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CYFIP2Q96F07 1278 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 PCDHB18PQ96TA0 734 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 ERP44Q9BS26 406 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 KCNH7Q9NS40 1196 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 MRPL11Q9Y3B7 192 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 DAAM1Q9Y4D1 1078 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 CAND2O75155 1236 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 CCDC172P0C7W6 258 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 RXRBP28702 533 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 PPP2R2AP63151 447 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 MIER3Q7Z3K6 550 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 KCTD17Q8N5Z5 321 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 UHMK1Q8TAS1 419 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 FBXO25Q8TCJ0 367 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 MXRA8Q9BRK3 442 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 ZDHHC18Q9NUE0 388 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 ZHX2Q9Y6X8 837 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 UBE4BO95155 1302 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 TCRBV7S2A1N4TA0A589 114 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 SMIM23A6NLE4 172 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 NFIBO00712 420 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 APBA3O96018 575 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 BCRP11274 1271 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 BIRC3Q13489 604 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 JAMLQ86YT9 394 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 ARFGAP2Q8N6H7 521 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 CHURC1Q8WUH1 139 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 TMEM39BQ9GZU3 492 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 EPB41L4BQ9H329 900 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 EFCC1Q9HA90 598 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 VEZTQ9HBM0 779 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 HERC5Q9UII4 1024 aaKnown RBP17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 ZNF646O15015 1829 aaPredicted RBP17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 GMNCA6NCL1 334 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 RAD17O75943 681 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 HMGB2P26583 209 aaKnown RBP17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 SF3A3Q12874 501 aaKnown RBP eCLIP17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 SPP2Q13103 211 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 SLC9A9Q8IVB4 645 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 RAB17Q9H0T7 212 aa17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 ZBTB12Q9Y330 459 aaPredicted RBP17.66■□□□□ 0.42
TM9SF1-201ENST00000261789 GOLGA6L10A0A0M3HER8 536 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 PPIP5K2O43314 1243 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 PPFIA2O75334 1257 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 COMTP21964 271 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 DGKZQ13574 1117 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 TTC27Q6P3X3 843 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 SLC47A2Q86VL8 602 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 RAPGEF5Q92565 580 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 TXLNGYQ9BZA5 131 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 VCPKMTQ9H867 229 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 HOMER2Q9NSB8 354 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 HSPBP1Q9NZL4 362 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 KCND2Q9NZV8 630 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 TLDC2A0PJX2 215 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 CYP26A1O43174 497 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 TRAPPC3O43617 180 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 MAP2K1Q02750 393 aaPredicted RBP17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 KCNV1Q6PIU1 500 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 INTS8Q75QN2 995 aaKnown RBP17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 NOP9Q86U38 636 aaKnown RBP17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 PRELID2Q8N945 189 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 POP1Q99575 1024 aaKnown RBP17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 LARSQ9P2J5 1176 aaKnown RBP17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 DDX20Q9UHI6 824 aaKnown RBP17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 PTPN22Q9Y2R2 807 aa17.65■□□□□ 0.42
TM9SF1-201ENST00000261789 SPDYE2BA6NHP3 402 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 KIAA0391O15091 583 aaKnown RBP17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 SLC16A4O15374 487 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 CALCAP01258 141 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 SPDYE6P0CI01 402 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 FNTAP49354 379 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 RARRES1P49788 294 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 SETQ01105 290 aaPredicted RBP17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 ZDHHC24Q6UX98 284 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 CPXCR1Q8N123 301 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 PPM1KQ8N3J5 372 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 TMOD2Q9NZR1 351 aa17.64■□□□□ 0.42
TM9SF1-201ENST00000261789 PHF20L1A8MW92 1017 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 H0YHG0 523 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 DHX15O43143 795 aaKnown RBP17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 MMEP08473 750 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 PYGMP11217 842 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 CHRNB2P17787 502 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 HNRNPH1P31943 449 aaKnown RBP17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 GPC5P78333 572 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 UGCGQ16739 394 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 SPRED3Q2MJR0 410 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 EPC2Q52LR7 807 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 AGBL2Q5U5Z8 902 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 RHOT2Q8IXI1 618 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 RNF25Q96BH1 459 aaPredicted RBP17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 CCDC127Q96BQ5 260 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 FAM84AQ96KN4 292 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 PSMD1Q99460 953 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 KIFC3Q9BVG8 833 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 TMEM117Q9H0C3 514 aa17.64■□□□□ 0.41
TM9SF1-201ENST00000261789 EHMT1Q9H9B1 1298 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms