RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 KIAA0895Q8NCT3 520 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 NAA15Q9BXJ9 866 aaKnown RBP20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 RASSF9O75901 435 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 PRCPP42785 496 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 GNGT1P63211 74 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 SPECC1LQ69YQ0 1117 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 AFG1LQ8WV93 481 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 ZHX3Q9H4I2 956 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 SLC39A2Q9NP94 309 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 GRIN2DO15399 1336 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 USO1O60763 962 aaKnown RBP20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 TBCAO75347 108 aaKnown RBP20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 GGCXP38435 758 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 CCNHP51946 323 aaPredicted RBP20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 PSMD2Q13200 908 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 DRP2Q13474 957 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 CCDC40Q4G0X9 1142 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 KLHL10Q6JEL2 608 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 OR6J1Q8NGC5 347 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 GLG1Q92896 1179 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 CEP170P1Q96L14 293 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 MRPL44Q9H9J2 332 aaKnown RBP20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 POLD4Q9HCU8 107 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 BATF3Q9NR55 127 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 MAPK8IP1Q9UQF2 711 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 HERC4Q5GLZ8 1057 aaPredicted RBP20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 FAM26FQ5R3K3 315 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 PLPPR4Q7Z2D5 763 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 ATP6V0A4Q9HBG4 840 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 MYO1AQ9UBC5 1043 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 SRRDQ9UH36 339 aa20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 GNEQ9Y223 722 aaKnown RBP20.55■□□□□ 0.88
COL4A3BP-201ENST00000261415 TARSL2A2RTX5 802 aaKnown RBP20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 GOLGA8KD6RF30 607 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 NDUFAB1O14561 156 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 IPO7O95373 1038 aaKnown RBP20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 ERCC5P28715 1186 aaPredicted RBP20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 SNCBQ16143 134 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 ZNF569Q5MCW4 686 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 MFSD14CQ5VZR4 134 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 KIAA1328Q86T90 577 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 ADSSL1Q8N142 457 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 CCDC26Q8TAB7 109 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 NAPGQ99747 312 aaPredicted RBP20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 SH3GL2Q99962 352 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 CYP26B1Q9NR63 512 aa20.54■□□□□ 0.88
COL4A3BP-201ENST00000261415 FKTNO75072 461 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 HOXD10P28358 340 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 RBBP5Q15291 538 aaKnown RBP20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 ZNF296Q8WUU4 475 aaPredicted RBP20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 SMARCAD1Q9H4L7 1026 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 LZTFL1Q9NQ48 299 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 GGA2Q9UJY4 613 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 CTNND2Q9UQB3 1225 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 PCDHA2Q9Y5H9 948 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 COL4A3BPQ9Y5P4 624 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 ZEB2O60315 1214 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 FAM13AO94988 1023 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 CYBAP13498 195 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 SLC8A1P32418 973 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 ACTN3Q08043 901 aaPredicted RBP20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 MTERF2Q49AM1 385 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 COBLL1Q53SF7 1204 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 SFR1Q86XK3 245 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 TRMT44Q8IYL2 757 aaKnown RBP20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 TRPV1Q8NER1 839 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 LENG1Q96BZ8 264 aaPredicted RBP20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 PANX2Q96RD6 677 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 MED15Q96RN5 788 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 DESI2Q9BSY9 194 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 NIFKQ9BYG3 293 aaKnown RBP20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 IRX2Q9BZI1 471 aaPredicted RBP20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 TBC1D7Q9P0N9 293 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 FAM184BQ9ULE4 1060 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 ADGRG1Q9Y653 693 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 SYNRGQ9UMZ2 1314 aa20.53■□□□□ 0.88
COL4A3BP-201ENST00000261415 SFI1A8K8P3 1242 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 HIP1RO75146 1068 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 GNRH1P01148 92 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 LGALS2P05162 132 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 MARK3P27448 753 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 ZNF131P52739 623 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 C1QTNF8P60827 252 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 MAPK7Q13164 816 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 MAEAQ7L5Y9 396 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 TLK2Q86UE8 772 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 DAW1Q8N136 415 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 GLIS3Q8NEA6 775 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 FAM167AQ96KS9 214 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 NUCKS1Q9H1E3 243 aaKnown RBP20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 PARVGQ9HBI0 331 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 FANCLQ9NW38 375 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 MMP3P08254 477 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 GAP43P17677 238 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 SLC26A2P50443 739 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 SKOR1P84550 965 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 MAB21L3Q8N8X9 362 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 TIPINQ9BVW5 301 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 FGFBP2Q9BYJ0 223 aa20.52■□□□□ 0.88
COL4A3BP-201ENST00000261415 NRBP2Q9NSY0 501 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms