RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 FOXR2Q6PJQ5 311 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 FMNL3Q8IVF7 1028 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 HOOK2Q96ED9 719 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 LBHD1Q9BQE6 289 aaPredicted RBP17.13■□□□□ 0.33
LMNB1-201ENST00000261366 MXD3Q9BW11 206 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 EBF2Q9HAK2 575 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 KIF9Q9HAQ2 790 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 PFASO15067 1338 aa17.13■□□□□ 0.33
LMNB1-201ENST00000261366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.12■□□□□ 0.33
LMNB1-201ENST00000261366 TGFB1I1O43294 461 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 DLATP10515 647 aaKnown RBP17.12■□□□□ 0.33
LMNB1-201ENST00000261366 COMTP21964 271 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 FMO5P49326 533 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 IKQ13123 557 aaPredicted RBP17.12■□□□□ 0.33
LMNB1-201ENST00000261366 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 ZC3H3Q8IXZ2 948 aaKnown RBP17.12■□□□□ 0.33
LMNB1-201ENST00000261366 FITM2Q8N6M3 262 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 FAM118BQ9BPY3 351 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 ADAM33Q9BZ11 813 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 FAM187AA6NFU0 413 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 DHX34Q14147 1143 aaKnown RBP17.12■□□□□ 0.33
LMNB1-201ENST00000261366 HYIQ5T013 277 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 PHLDB2Q86SQ0 1253 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 TPH2Q8IWU9 490 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
LMNB1-201ENST00000261366 METTL14Q9HCE5 456 aaKnown RBP17.12■□□□□ 0.33
LMNB1-201ENST00000261366 FAM13AO94988 1023 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 GSTA1P08263 222 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 NPEPPSP55786 919 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 TAOK1Q7L7X3 1001 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 INTS2Q9H0H0 1204 aaKnown RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 CDC42EP4Q9H3Q1 356 aaKnown RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 PCIF1Q9H4Z3 704 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 SPOPO43791 374 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 SUN1O94901 812 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 TTLL1O95922 423 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 COPS2P61201 443 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 ARHGAP4P98171 946 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 SYT2Q8N9I0 419 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 STK33Q9BYT3 514 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 YIPF3Q9GZM5 350 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 KCNMB3Q9NPA1 279 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 ASIC3Q9UHC3 531 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 GPR75-ASB3A0A0A6YYF3 556 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 CFAP73A6NFT4 308 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 hCG_1984214I3L0E3 225 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 RGL2O15211 777 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 SMARCA1P28370 1054 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 CHKAP35790 457 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 PSMC2P35998 433 aaKnown RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 MPP2Q14168 576 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 KYNUQ16719 465 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 SEL1L2Q5TEA6 688 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 PHLDB3Q6NSJ2 640 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 EPM2AIP1Q7L775 607 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 UBL4BQ8N7F7 174 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 ZNF713Q8N859 430 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 ATG4AQ8WYN0 398 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 UBE2TQ9NPD8 197 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-201ENST00000261366 HOMER3Q9NSC5 361 aa17.11■□□□□ 0.33
LMNB1-201ENST00000261366 PITPNM2Q9BZ72 1349 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 EML1O00423 815 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 MSH2P43246 934 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 CALCOCO2Q13137 446 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 ZNF268Q14587 947 aaPredicted RBP17.1■□□□□ 0.33
LMNB1-201ENST00000261366 KAT5Q92993 513 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 MRRFQ96E11 262 aaKnown RBP17.1■□□□□ 0.33
LMNB1-201ENST00000261366 GPR88Q9GZN0 384 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 DDX4Q9NQI0 724 aaKnown RBP17.1■□□□□ 0.33
LMNB1-201ENST00000261366 INTUQ9ULD6 942 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 TTC7AQ9ULT0 858 aaPredicted RBP17.1■□□□□ 0.33
LMNB1-201ENST00000261366 RABGAP1Q9Y3P9 1069 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 LAMB2P55268 1798 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 EME2A4GXA9 379 aaPredicted RBP17.1■□□□□ 0.33
LMNB1-201ENST00000261366 TISP43B9A030 160 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 ZNF76P36508 570 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 UBXN2AP68543 259 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 SPATA21Q7Z572 469 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 PRUNE1Q86TP1 453 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 SRRM1Q8IYB3 904 aaKnown RBP17.1■□□□□ 0.33
LMNB1-201ENST00000261366 ERMNQ8TAM6 284 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 TMEM237Q96Q45 408 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 TGS1Q96RS0 853 aaKnown RBP17.1■□□□□ 0.33
LMNB1-201ENST00000261366 ETNK1Q9HBU6 452 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 NCANO14594 1321 aa17.1■□□□□ 0.33
LMNB1-201ENST00000261366 ANKRD62A6NC57 917 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 CLDN3O15551 220 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 BRAFP15056 766 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 CHRNA3P32297 505 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 STX2P32856 288 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 MYL7Q01449 175 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 H0Y3Z8 333 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms