RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PROM2Q8N271 834 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 IGDCC4Q8TDY8 1250 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 L2HGDHQ9H9P8 463 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 TBC1D23Q9NUY8 699 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 TARSP26639 723 aaKnown RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CPA2P48052 419 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CEP55Q53EZ4 464 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 PASD1Q8IV76 773 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 C4orf33Q8N1A6 199 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 SKA2Q8WVK7 121 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 THTPAQ9BU02 230 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 HESX1Q9UBX0 185 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 LEMD3Q9Y2U8 911 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CDHR2Q9BYE9 1310 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 PALM3A6NDB9 673 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 STAT3P40763 770 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 GPS1Q13098 491 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 PDXDC1Q6P996 788 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 ANKMY2Q8IV38 441 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CCDC117Q8IWD4 279 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZBTB8OSQ8IWT0 167 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 MYCBPAPQ8TBZ2 947 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CHCHD3Q9NX63 227 aaKnown RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 MARCOQ9UEW3 520 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 PALLDQ8WX93 1383 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CLRN2A0PK11 232 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 MIF4GDA9UHW6 222 aaKnown RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 TDP2O95551 362 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZBED1O96006 694 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 POTEIP0CG38 1075 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 PYGBP11216 843 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 MAP4P27816 1152 aaKnown RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 ANTXR2P58335 489 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CDO1Q16878 200 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 POTEEQ6S8J3 1075 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 PDZD4Q76G19 769 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 SNF8Q96H20 258 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CEP170P1Q96L14 293 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 GTSE1Q9NYZ3 720 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 FAM187AA6NFU0 413 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 hCG_1984214I3L0E3 225 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 CDC25CP30307 473 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 PAPOLAP51003 745 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 KRT17Q04695 432 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 FLOT2Q14254 428 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 GLYCTKQ8IVS8 523 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZNF713Q8N859 430 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 HNRNPLLQ8WVV9 542 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 CSRNP1Q96S65 589 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRABDQ9H4I3 376 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 DCP1AQ9NPI6 582 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 KCNG1Q9UIX4 513 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 CROCC2H7BZ55 1655 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 GFAPP14136 432 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 COPS2P61201 443 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 GPC5P78333 572 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 DRAP1Q14919 205 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRIP10Q15642 601 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 LRRC34Q8IZ02 419 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 NCLNQ969V3 563 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 CCDC17Q96LX7 622 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 DACH2Q96NX9 599 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 PVALEFA0A1B0GWK0 134 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 TJP3O95049 919 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ALDH1B1P30837 517 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 NUP85Q9BW27 656 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 NACA2Q9H009 215 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 BCS1LQ9Y276 419 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 FNDC3AQ9Y2H6 1198 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 RNF17Q9BXT8 1623 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 TULP4Q9NRJ4 1543 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 REREQ9P2R6 1566 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 BMP3P12645 472 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 MARK3P27448 753 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 AP1B1Q10567 949 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 IZUMO3Q5VZ72 239 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ACAD11Q709F0 780 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 WDR11Q9BZH6 1224 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 PAPOLBQ9NRJ5 636 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ANGPTL3Q9Y5C1 460 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZCCHC11Q5TAX3 1644 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ERVV-1B6SEH8 477 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 UBE2Q2LH0YL09 131 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 PEX3P56589 373 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 IGBP1P78318 339 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 TSTA3Q13630 321 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 THOC5Q13769 683 aaKnown RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 CCDC85BQ15834 202 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 KLHL38Q2WGJ6 581 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 BTNL9Q6UXG8 535 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 SCARA5Q6ZMJ2 495 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZNF564Q8TBZ8 553 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZNF507Q8TCN5 953 aa10.36□□□□□ -0.75
CTDSPL2-201ENST00000260327 CELF4Q9BZC1 486 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms