RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 SNX17Q15036 470 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 ANKRD40Q6AI12 368 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 CENPPQ6IPU0 288 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 SLC39A5Q6ZMH5 540 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 ENOX1Q8TC92 643 aaKnown RBP17.11■□□□□ 0.33
GYPC-201ENST00000259254 WNT8BQ93098 351 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 CTAGE1Q96RT6 745 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 CELF4Q9BZC1 486 aaKnown RBP17.11■□□□□ 0.33
GYPC-201ENST00000259254 IKZF4Q9H2S9 585 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 ADAMTS10Q9H324 1103 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
GYPC-201ENST00000259254 CDY2AQ9Y6F7 541 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 MROH7Q68CQ1 1323 aa17.11■□□□□ 0.33
GYPC-201ENST00000259254 SCN10AQ9Y5Y9 1956 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 GOLGA6L3A6NEY3 463 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 PDXKO00764 312 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 HNRNPDLO14979 420 aaKnown RBP17.1■□□□□ 0.33
GYPC-201ENST00000259254 GPR32O75388 356 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 CSDE1O75534 798 aaKnown RBP17.1■□□□□ 0.33
GYPC-201ENST00000259254 ERLIN2O94905 339 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 CRYBB1P53674 252 aaPredicted RBP17.1■□□□□ 0.33
GYPC-201ENST00000259254 MBTD1Q05BQ5 628 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 IQCB1Q15051 598 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 SPATA1Q5VX52 437 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 TTI2Q6NXR4 508 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 TAS1R3Q7RTX0 852 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
GYPC-201ENST00000259254 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 CSGALNACT2Q8N6G5 542 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 CCDC155Q8N6L0 562 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 GOLGA5Q8TBA6 731 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 DHX38Q92620 1227 aaKnown RBP17.1■□□□□ 0.33
GYPC-201ENST00000259254 MRPL4Q9BYD3 311 aaKnown RBP17.1■□□□□ 0.33
GYPC-201ENST00000259254 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 KCTD10Q9H3F6 313 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 CDHR5Q9HBB8 845 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 IFT122Q9HBG6 1241 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 PRMT7Q9NVM4 692 aaPredicted RBP17.1■□□□□ 0.33
GYPC-201ENST00000259254 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 NFE2L3Q9Y4A8 694 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 ZMYM2Q9UBW7 1377 aa17.1■□□□□ 0.33
GYPC-201ENST00000259254 RANBP2P49792 3224 aaKnown RBP17.09■□□□□ 0.33
GYPC-201ENST00000259254 DCDC2CA8MYV0 355 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 IKBKBO14920 756 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 CLIC2O15247 247 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 DARSP14868 501 aaKnown RBP17.09■□□□□ 0.33
GYPC-201ENST00000259254 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.333e-6■■■■■ 30.1
GYPC-201ENST00000259254 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
GYPC-201ENST00000259254 GSE1Q14687 1217 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 TRIM60Q495X7 471 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 RPAINQ86UA6 219 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 IFNLR1Q8IU57 520 aaPredicted RBP17.09■□□□□ 0.33
GYPC-201ENST00000259254 MED15Q96RN5 788 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 TARS2Q9BW92 718 aaKnown RBP17.09■□□□□ 0.33
GYPC-201ENST00000259254 MINDY3Q9H8M7 445 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 AGPAT3Q9NRZ7 376 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 USP20Q9Y2K6 914 aa17.09■□□□□ 0.33
GYPC-201ENST00000259254 WDR81Q562E7 1941 aa17.08■□□□□ 0.33
GYPC-201ENST00000259254 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 CAND2O75155 1236 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 FGFR4P22455 802 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 SFPQP23246 707 aaKnown RBP eCLIP17.08■□□□□ 0.32
GYPC-201ENST00000259254 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.32
GYPC-201ENST00000259254 TRIM71Q2Q1W2 868 aaKnown RBP17.08■□□□□ 0.32
GYPC-201ENST00000259254 ZCWPW2Q504Y3 356 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 C1orf53Q5VUE5 145 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 ARMCX5Q6P1M9 558 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 CATSPER4Q7RTX7 472 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 NOC3LQ8WTT2 800 aaKnown RBP17.08■□□□□ 0.32
GYPC-201ENST00000259254 DUSP9Q99956 384 aaKnown RBP17.08■□□□□ 0.32
GYPC-201ENST00000259254 FZD8Q9H461 694 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 PCDH10Q9P2E7 1040 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 ANKFY1Q9P2R3 1169 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 TRAF3IP3Q9Y228 551 aa17.08■□□□□ 0.32
GYPC-201ENST00000259254 DNAH12Q6ZR08 3092 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 TISP43B9A030 160 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 ANKRD63C9JTQ0 380 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 ACKR2O00590 384 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 CETN3O15182 167 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 B4GALT5O43286 388 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 FGFR1OPO95684 399 aaKnown RBP17.07■□□□□ 0.32
GYPC-201ENST00000259254 NR3C1P04150 777 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 EIF4BP23588 611 aaKnown RBP17.07■□□□□ 0.32
GYPC-201ENST00000259254 NR2F2P24468 414 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 CYP2J2P51589 502 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 SNRPFP62306 86 aaKnown RBP17.07■□□□□ 0.32
GYPC-201ENST00000259254 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
GYPC-201ENST00000259254 TLE2Q04725 743 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 NCBP1Q09161 790 aaKnown RBP17.07■□□□□ 0.32
GYPC-201ENST00000259254 BFSP2Q13515 415 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 NCAPHQ15003 741 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 EDRF1Q3B7T1 1238 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 CREBRFQ8IUR6 639 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 KCNN1Q92952 543 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 EEF2KMTQ96G04 330 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms