RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 CHD1O14646 1710 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 CTIFO43310 598 aaKnown RBP14.3□□□□□ -0.12
ALPK3-201ENST00000258888 ICE2Q659A1 982 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 CEP70Q8NHQ1 597 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 ZNF668Q96K58 619 aaPredicted RBP14.3□□□□□ -0.12
ALPK3-201ENST00000258888 EMSYQ7Z589 1322 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 ZNF335Q9H4Z2 1342 aaPredicted RBP14.3□□□□□ -0.12
ALPK3-201ENST00000258888 ARHGEF37A1IGU5 675 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 ATP5HO75947 161 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 PAMP19021 973 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 ATP2C1P98194 919 aaPredicted RBP14.3□□□□□ -0.12
ALPK3-201ENST00000258888 CDHR2Q9BYE9 1310 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 CDR2Q01850 454 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 FSCBQ5H9T9 825 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 KRT27Q7Z3Y8 459 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
ALPK3-201ENST00000258888 TTC13Q8NBP0 860 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 GNA15P30679 374 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 SDC4P31431 198 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 CCDC137Q6PK04 289 aaKnown RBP14.3□□□□□ -0.12
ALPK3-201ENST00000258888 TRIML2Q8N7C3 387 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 MTRQ99707 1265 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 EDEM3Q9BZQ6 932 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 GABBR1Q9UBS5 961 aa14.3□□□□□ -0.12
ALPK3-201ENST00000258888 SCARF1Q14162 830 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 NAALADL2Q58DX5 795 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 DALRD3Q5D0E6 543 aaKnown RBP14.29□□□□□ -0.12
ALPK3-201ENST00000258888 GIPC2Q8TF65 315 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 FAM167AQ96KS9 214 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 GPC3P51654 580 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 TDRD3Q9H7E2 651 aaKnown RBP14.29□□□□□ -0.12
ALPK3-201ENST00000258888 CYP26B1Q9NR63 512 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 BRAFP15056 766 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 STAG2Q8N3U4 1231 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 FAM20AQ96MK3 541 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 SLC4A7Q9Y6M7 1214 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 ZNF185O15231 689 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 DPF2Q92785 391 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 KIF2CQ99661 725 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 TRPV6Q9H1D0 765 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 ETNK1Q9HBU6 452 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 MYCP01106 439 aaPredicted RBP14.29□□□□□ -0.12
ALPK3-201ENST00000258888 RCSD1Q6JBY9 416 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 FRA10AC1Q70Z53 315 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 ECE2O60344 883 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 MYL3P08590 195 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 NCAPHQ15003 741 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 FAM167BQ9BTA0 163 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 ROR1Q01973 937 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 MED14O60244 1454 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 NT5C2P49902 561 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 COPS2P61201 443 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 ANKRD40Q6AI12 368 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 SLC9A2Q9UBY0 812 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 ZHX2Q9Y6X8 837 aa14.29□□□□□ -0.12
ALPK3-201ENST00000258888 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 KRT14P02533 472 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 RFFLQ8WZ73 363 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 IRX2Q9BZI1 471 aaPredicted RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 KIAA1586Q9HCI6 787 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 ZNF302Q9NR11 478 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 RNF146Q9NTX7 359 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 KLHL11Q9NVR0 708 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 ZNF609O15014 1411 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 DEUP1Q05D60 604 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 MORF4L2Q15014 288 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 FAM161BQ96MY7 647 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 WNT8AQ9H1J5 351 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 TBC1D22BQ9NU19 505 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 CAPN11Q9UMQ6 739 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 LMBRD2Q68DH5 695 aaPredicted RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 COG1Q8WTW3 980 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 SLITRK6Q9H5Y7 841 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 L3MBTL1Q9Y468 752 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 PPP1R12AO14974 1030 aaPredicted RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 CHUKO15111 745 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 IZUMO3Q5VZ72 239 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 TTLL6Q8N841 843 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 PSPC1Q8WXF1 523 aaKnown RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 MASTLQ96GX5 879 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 RNPC3Q96LT9 517 aaKnown RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 FBXO2Q9UK22 296 aaPredicted RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 SMARCA1P28370 1054 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 PAPOLAP51003 745 aaKnown RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 KRT76Q01546 638 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 CYFIP1Q7L576 1253 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 SGMS1Q86VZ5 419 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 MS4A14Q96JA4 679 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 EIF2AK1Q9BQI3 630 aaKnown RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 SLC13A1Q9BZW2 595 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 ALG13Q9NP73 1137 aaKnown RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 TBXAS1P24557 533 aaPredicted RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 C1orf228Q6PIY5 440 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 CYP4F11Q9HBI6 524 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 AMACRQ9UHK6 382 aa14.28□□□□□ -0.12
ALPK3-201ENST00000258888 QARSP47897 775 aaKnown RBP14.28□□□□□ -0.12
ALPK3-201ENST00000258888 SPATA4Q8NEY3 305 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms