RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 RGL2O15211 777 aa7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 ZNF76P36508 570 aa7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 SEC24CP53992 1094 aa7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 UAP1Q16222 522 aaPredicted RBP7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 ZNF574Q6ZN55 896 aaPredicted RBP7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 NFATC2IPQ8NCF5 419 aa7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 APPL2Q8NEU8 664 aa7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 LRRC37BQ96QE4 947 aa7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 CCDC90BQ9GZT6 254 aa7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 SPATA2Q9UM82 520 aa7.17□□□□□ -1.26
PDGFRA-201ENST00000257290 GRM8O00222 908 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 GAS7O60861 476 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 TSC22D2O75157 780 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 DLGAP3O95886 979 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 NPPAP01160 153 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ZNF12P17014 697 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 MAN1A1P33908 653 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ETV3P41162 512 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 IL12RB1P42701 662 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 SLC39A6Q13433 755 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 COPS6Q7L5N1 327 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 RHPN1Q8TCX5 695 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 DIS3LQ8TF46 1054 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CCDC127Q96BQ5 260 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 SLC10A4Q96EP9 437 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 COQ6Q9Y2Z9 468 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 MAGED1Q9Y5V3 778 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 SPATA31D1Q6ZQQ2 1576 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ZBBXA8MT70 800 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 MAP2K7O14733 419 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ZBED4O75132 1171 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 RNASEH2AO75792 299 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 MTA2O94776 668 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CYP2C9P11712 490 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 P4HA1P13674 534 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ZNF18P17022 549 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CCT8P50990 548 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CSNK2BP67870 215 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 STRN3Q13033 797 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 MKRN3Q13064 507 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CLPPQ16740 277 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 KRT24Q2M2I5 525 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 SLC44A2Q8IWA5 706 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 KLHL7Q8IXQ5 586 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ANKRD13CQ8N6S4 541 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 SYTL5Q8TDW5 730 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 OSBP2Q969R2 916 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 NOX5Q96PH1 765 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 PANX2Q96RD6 677 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 NUP58Q9BVL2 599 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 GOLPH3LQ9H4A5 285 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ADGRL3Q9HAR2 1447 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 IQGAP1P46940 1657 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 FRMPD1Q5SYB0 1578 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 KRT37O76014 449 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 SCG2P13521 617 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CALB2P22676 271 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ALDH18A1P54886 795 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 TTF1Q15361 905 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CAVIN4Q5BKX8 364 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 HMBOX1Q6NT76 420 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 DUS1LQ6P1R4 473 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 TRMT2AQ8IZ69 625 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 BORCS5Q969J3 196 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 DACH2Q96NX9 599 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 RNF38Q9H0F5 515 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 DCTPP1Q9H773 170 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 NEK6Q9HC98 313 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 RPRD1BQ9NQG5 326 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 C20orf96Q9NUD7 363 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 AGAP1Q9UPQ3 857 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 PLCL2Q9UPR0 1127 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 H7C0C1 242 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 H7C1W4 665 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 LGR5O75473 907 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ZBED1O96006 694 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 HOXD11P31277 338 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 PKP1Q13835 747 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 MORC3Q14149 939 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 DGKKQ5KSL6 1271 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 FAM47EQ6ZV65 393 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 DHX32Q7L7V1 743 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 PEX26Q7Z412 305 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CITED4Q96RK1 184 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 DNAJC11Q9NVH1 559 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 STX8Q9UNK0 236 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 IGSF1Q8N6C5 1336 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 E2F3O00716 465 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 TNFRSF21O75509 655 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 RGS20O76081 388 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ADKP55263 362 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 GRAMD2AQ8IUY3 354 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 PGBD4Q96DM1 585 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 ACSBG1Q96GR2 724 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 PLEKHA5Q9HAU0 1116 aa7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 CCDC59Q9P031 241 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 NSFL1CQ9UNZ2 370 aaKnown RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 USP15Q9Y4E8 981 aaPredicted RBP7.16□□□□□ -1.26
PDGFRA-201ENST00000257290 SRRM3A6NNA2 597 aaPredicted RBP7.15□□□□□ -1.26
PDGFRA-201ENST00000257290 HEXIM1O94992 359 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms