RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 LRRIQ4A6NIV6 560 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 SPTLC2O15270 562 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 SLC26A4O43511 780 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 ERLIN2O94905 339 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 EOMESO95936 686 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 SSBP05455 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
TMEM258-201ENST00000257262 PLA2G4BP0C869 781 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 FGFR1P11362 822 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 FOSL2P15408 326 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 PLCG1P19174 1290 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 HOXA11P31270 313 aaPredicted RBP9.43□□□□□ -0.9
TMEM258-201ENST00000257262 NAMPTP43490 491 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 GATMP50440 423 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 SLC12A3P55017 1021 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 MBTD1Q05BQ5 628 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 RAD51AP2Q09MP3 1159 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 ADGRE1Q14246 886 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 DHX8Q14562 1220 aaKnown RBP9.43□□□□□ -0.9
TMEM258-201ENST00000257262 STK38Q15208 465 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 AMHR2Q16671 573 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 LONRF3Q496Y0 759 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 PAN2Q504Q3 1202 aaKnown RBP9.43□□□□□ -0.9
TMEM258-201ENST00000257262 TWF2Q6IBS0 349 aaKnown RBP9.43□□□□□ -0.9
TMEM258-201ENST00000257262 LRRC15Q8TF66 581 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 BSNDQ8WZ55 320 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
TMEM258-201ENST00000257262 KIFAP3Q92845 792 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 CPB2Q96IY4 423 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 TRAIPQ9BWF2 469 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 NFKBIZQ9BYH8 718 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 CCSER1Q9C0I3 900 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 CCDC39Q9UFE4 941 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 ZDHHC9Q9Y397 364 aa9.43□□□□□ -0.9
TMEM258-201ENST00000257262 MORC2Q9Y6X9 1032 aaPredicted RBP9.43□□□□□ -0.9
TMEM258-201ENST00000257262 NPHP3-ACAD11A0A0J9YXS1 232 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 TBKBP1A7MCY6 615 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 SFI1A8K8P3 1242 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 B4GALT5O43286 388 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 TSPAN1O60635 241 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 HIP1RO75146 1068 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 PPP6R2O75170 966 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 YEATS4O95619 227 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 BRD1O95696 1058 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 LINC00271P0C7V0 271 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 IGFBP4P22692 258 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 GUCY2CP25092 1073 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 AXLP30530 894 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 DDIT3P35638 169 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 DNM1Q05193 864 aaKnown RBP9.42□□□□□ -0.9
TMEM258-201ENST00000257262 NCBP1Q09161 790 aaKnown RBP9.42□□□□□ -0.9
TMEM258-201ENST00000257262 PPP2R5AQ15172 486 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 PCBP1Q15365 356 aaKnown RBP eCLIP9.42□□□□□ -0.9
TMEM258-201ENST00000257262 EPC2Q52LR7 807 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 ARSHQ5FYA8 562 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 UBXN11Q5T124 520 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
TMEM258-201ENST00000257262 ZBTB8OSQ8IWT0 167 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 TMEM192Q8IY95 271 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
TMEM258-201ENST00000257262 DAW1Q8N136 415 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 KRI1Q8N9T8 703 aaKnown RBP9.42□□□□□ -0.9
TMEM258-201ENST00000257262 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 RASSF8Q8NHQ8 419 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 DEPTORQ8TB45 409 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 IFT74Q96LB3 600 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 CASD1Q96PB1 797 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 PANK2Q9BZ23 570 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 FZD8Q9H461 694 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 BLOC1S4Q9NUP1 217 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 FAM105AQ9NUU6 356 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 RNF19AQ9NV58 838 aa9.42□□□□□ -0.9
TMEM258-201ENST00000257262 MRPL42Q9Y6G3 142 aaKnown RBP9.42□□□□□ -0.9
TMEM258-201ENST00000257262 MYH11P35749 1972 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 CCDC169A6NNP5 214 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 LPXNO60711 386 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 ZNF623O75123 536 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 SKIP12755 728 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 ATF7P17544 494 aaPredicted RBP9.41□□□□□ -0.9
TMEM258-201ENST00000257262 ARF4P18085 180 aaPredicted RBP9.41□□□□□ -0.9
TMEM258-201ENST00000257262 LIG1P18858 919 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 BMPR1AP36894 532 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 PEX3P56589 373 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
TMEM258-201ENST00000257262 MAPK7Q13164 816 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 MCM6Q14566 821 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 CDCA2Q69YH5 1023 aaPredicted RBP9.41□□□□□ -0.9
TMEM258-201ENST00000257262 ATL3Q6DD88 541 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 LRRC55Q6ZSA7 311 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 CDR2LQ86X02 465 aaPredicted RBP9.41□□□□□ -0.9
TMEM258-201ENST00000257262 HELQQ8TDG4 1101 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 GDPD5Q8WTR4 605 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 LARP4BQ92615 738 aaKnown RBP9.41□□□□□ -0.9
TMEM258-201ENST00000257262 RAD54LQ92698 747 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 CLP1Q92989 425 aaKnown RBP9.41□□□□□ -0.9
TMEM258-201ENST00000257262 LPPQ93052 612 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 DRC1Q96MC2 740 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 SAMD11Q96NU1 681 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 KIFC3Q9BVG8 833 aa9.41□□□□□ -0.9
TMEM258-201ENST00000257262 TIPINQ9BVW5 301 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms