RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 FMO5P49326 533 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 SLC26A2P50443 739 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 DPY19L2P1Q6NXN4 242 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 CBWD2Q8IUF1 395 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 OR6J1Q8NGC5 347 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 POMGNT1Q8WZA1 660 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 EMID1Q96A84 441 aaPredicted RBP20.6■□□□□ 0.89
TRIM47-201ENST00000254816 GANQ9H2C0 597 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 ZNHIT6Q9NWK9 470 aaKnown RBP20.6■□□□□ 0.89
TRIM47-201ENST00000254816 GCNT4Q9P109 453 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 CEP72Q9P209 647 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 KAT6AQ92794 2004 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 HBP1O60381 514 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 TUBB4AP04350 444 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 EDN1P05305 212 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 CCDC175P0C221 793 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 SNRPFP62306 86 aaKnown RBP20.6■□□□□ 0.89
TRIM47-201ENST00000254816 PPP2R5AQ15172 486 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 PDXDC1Q6P996 788 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 GBP6Q6ZN66 633 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 PLEKHO2Q8TD55 490 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 TMEM174Q8WUU8 243 aa20.6■□□□□ 0.89
TRIM47-201ENST00000254816 ZNF668Q96K58 619 aaPredicted RBP20.6■□□□□ 0.89
TRIM47-201ENST00000254816 GJB1P08034 283 aa20.59■□□□□ 0.89
TRIM47-201ENST00000254816 KRT13P13646 458 aa20.59■□□□□ 0.89
TRIM47-201ENST00000254816 TM4SF4P48230 202 aa20.59■□□□□ 0.89
TRIM47-201ENST00000254816 USP6NLQ92738 828 aa20.59■□□□□ 0.89
TRIM47-201ENST00000254816 LENG1Q96BZ8 264 aaPredicted RBP20.59■□□□□ 0.89
TRIM47-201ENST00000254816 WDR24Q96S15 920 aa20.59■□□□□ 0.89
TRIM47-201ENST00000254816 PLAGL2Q9UPG8 496 aa20.59■□□□□ 0.89
TRIM47-201ENST00000254816 CENPFP49454 3210 aa20.59■□□□□ 0.89
TRIM47-201ENST00000254816 H0YCG3 227 aa20.58■□□□□ 0.89
TRIM47-201ENST00000254816 K7ERI5 159 aa20.58■□□□□ 0.89
TRIM47-201ENST00000254816 TNPO2O14787 897 aaKnown RBP20.58■□□□□ 0.89
TRIM47-201ENST00000254816 URI1O94763 535 aaPredicted RBP20.58■□□□□ 0.89
TRIM47-201ENST00000254816 VAMP7P51809 220 aa20.58■□□□□ 0.89
TRIM47-201ENST00000254816 TNFAIP2Q03169 654 aa20.58■□□□□ 0.89
TRIM47-201ENST00000254816 STRN3Q13033 797 aa20.58■□□□□ 0.89
TRIM47-201ENST00000254816 ERCC6LQ2NKX8 1250 aa20.58■□□□□ 0.89
TRIM47-201ENST00000254816 IQSEC1Q6DN90 963 aa20.58■□□□□ 0.89
TRIM47-201ENST00000254816 INTS8Q75QN2 995 aaKnown RBP20.58■□□□□ 0.89
TRIM47-201ENST00000254816 C16orf70Q9BSU1 422 aa20.58■□□□□ 0.89
TRIM47-201ENST00000254816 NHEJ1Q9H9Q4 299 aaPredicted RBP20.58■□□□□ 0.89
TRIM47-201ENST00000254816 EPN1Q9Y6I3 576 aaPredicted RBP20.58■□□□□ 0.89
TRIM47-201ENST00000254816 IGKV6-21A0A0C4DH24 114 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 MMP3P08254 477 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 SRGAP2CP0DJJ0 459 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 INSRRP14616 1297 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 LIG4P49917 911 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 GNG11P61952 73 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 SNRNP35Q16560 246 aaKnown RBP20.58■□□□□ 0.88
TRIM47-201ENST00000254816 BRDTQ58F21 947 aaPredicted RBP20.58■□□□□ 0.88
TRIM47-201ENST00000254816 IER5Q5VY09 327 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 GJB7Q6PEY0 223 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 METTL13Q8N6R0 699 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 GJD2Q9UKL4 321 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 PPME1Q9Y570 386 aa20.58■□□□□ 0.88
TRIM47-201ENST00000254816 NDUFA10O95299 355 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 CLCN3P51790 818 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 IRX5P78411 483 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-201ENST00000254816 LAMTOR4Q0VGL1 99 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 KLHDC7AQ5VTJ3 777 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 MSL3Q8N5Y2 521 aaKnown RBP20.57■□□□□ 0.88
TRIM47-201ENST00000254816 SIX2Q9NPC8 291 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 KCNG1Q9UIX4 513 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 AJAP1Q9UKB5 411 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-201ENST00000254816 FHOD1Q9Y613 1164 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 HOXC6P09630 235 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 PPP3CAQ08209 521 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 C1orf220Q5T0J3 134 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 EFCAB12Q6NXP0 572 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 RHPN2Q8IUC4 686 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 ZBTB45Q96K62 511 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-201ENST00000254816 EDEM3Q9BZQ6 932 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 ARHGAP39Q9C0H5 1083 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 LZTFL1Q9NQ48 299 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 ARHGAP20Q9P2F6 1191 aa20.57■□□□□ 0.88
TRIM47-201ENST00000254816 SUCLA2Q9P2R7 463 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-201ENST00000254816 REXO2Q9Y3B8 237 aaKnown RBP20.57■□□□□ 0.88
TRIM47-201ENST00000254816 DYNC1LI2O43237 492 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-201ENST00000254816 ADCY3O60266 1144 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 AOC2O75106 756 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 HNRNPH3P31942 346 aaKnown RBP20.56■□□□□ 0.88
TRIM47-201ENST00000254816 FBXO38Q6PIJ6 1188 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 TCP11Q8WWU5 503 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 PSPC1Q8WXF1 523 aaKnown RBP20.56■□□□□ 0.88
TRIM47-201ENST00000254816 TARS2Q9BW92 718 aaKnown RBP20.56■□□□□ 0.88
TRIM47-201ENST00000254816 HAPLN2Q9GZV7 340 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 PLCB1Q9NQ66 1216 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 H3BRB1 525 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 CA12O43570 354 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 PPFIA4O75335 1185 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 ABL1P00519 1130 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 ZNF865P0CJ78 1059 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-201ENST00000254816 UCHL3P15374 230 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 RGS2P41220 211 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 GCLMP48507 274 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 MYL7Q01449 175 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 OLFML2BQ68BL8 750 aa20.56■□□□□ 0.88
TRIM47-201ENST00000254816 RNF149Q8NC42 400 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms