RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 PRPF4BQ13523 1007 aaKnown RBP21.96■■□□□ 1.11
RARA-201ENST00000254066 CALCRLQ16602 461 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 CCDC65Q8IXS2 484 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 ARHGAP18Q8N392 663 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 ATL2Q8NHH9 583 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 SLC30A5Q8TAD4 765 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 RBM46Q8TBY0 533 aaKnown RBP21.96■■□□□ 1.11
RARA-201ENST00000254066 FGD4Q96M96 766 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 HDAC9Q9UKV0 1011 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 ACTL7BQ9Y614 415 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 USH1CQ9Y6N9 552 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 SHANK3Q9BYB0 1731 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 MIF4GDA9UHW6 222 aaKnown RBP21.96■■□□□ 1.11
RARA-201ENST00000254066 DCTN3O75935 186 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 SKIP12755 728 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 FGFR4P22455 802 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 PON1P27169 355 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 STX2P32856 288 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 VHLP40337 213 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 OCRLQ01968 901 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 MUM1Q2TAK8 710 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 MAEAQ7L5Y9 396 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 SLC35G2Q8TBE7 412 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 MGARPQ8TDB4 240 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 TLE6Q9H808 572 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 DMAP1Q9NPF5 467 aaPredicted RBP21.96■■□□□ 1.11
RARA-201ENST00000254066 PPP1R9AQ9ULJ8 1098 aa21.96■■□□□ 1.11
RARA-201ENST00000254066 MAPK13O15264 365 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 NVLO15381 856 aaKnown RBP21.95■■□□□ 1.1
RARA-201ENST00000254066 CYTH3O43739 400 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 PSMC4P43686 418 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 CCDC28BQ9BUN5 200 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 TIPINQ9BVW5 301 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 PCDHA2Q9Y5H9 948 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 SNAP23O00161 211 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 SLC9A1P19634 815 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 NAPAP54920 295 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 HADHBP55084 474 aaKnown RBP21.95■■□□□ 1.1
RARA-201ENST00000254066 SOGA3Q5TF21 947 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 TBCKQ8TEA7 893 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 U2AF1L4Q8WU68 220 aaKnown RBP21.95■■□□□ 1.1
RARA-201ENST00000254066 MYLK2Q9H1R3 596 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 C10orf71Q711Q0 1435 aa21.95■■□□□ 1.1
RARA-201ENST00000254066 PFASO15067 1338 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 PALM3A6NDB9 673 aaPredicted RBP21.94■■□□□ 1.1
RARA-201ENST00000254066 MAGEB2O15479 319 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 ACTN1P12814 892 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 KRT13P13646 458 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 RFC5P40937 340 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 SNX29Q8TEQ0 813 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 PITPNM3Q9BZ71 974 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 CRNKL1Q9BZJ0 848 aaKnown RBP21.94■■□□□ 1.1
RARA-201ENST00000254066 SPON1Q9HCB6 807 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 DCP1AQ9NPI6 582 aaPredicted RBP21.94■■□□□ 1.1
RARA-201ENST00000254066 PDP2Q9P2J9 529 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 ESYT2A0FGR8 921 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 GM2AP17900 193 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 HMGB2P26583 209 aaKnown RBP21.94■■□□□ 1.1
RARA-201ENST00000254066 CYP1B1Q16678 543 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 SLC35G1Q2M3R5 365 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 SLC27A3Q5K4L6 730 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 C7orf43Q8WVR3 580 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 CTNNBL1Q8WYA6 563 aaPredicted RBP21.94■■□□□ 1.1
RARA-201ENST00000254066 LRRC37BQ96QE4 947 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 KCNK9Q9NPC2 374 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 NKIRAS1Q9NYS0 192 aa21.94■■□□□ 1.1
RARA-201ENST00000254066 GTPBP10A4D1E9 387 aaKnown RBP21.93■■□□□ 1.1
RARA-201ENST00000254066 SMCO2A6NFE2 343 aa21.93■■□□□ 1.1
RARA-201ENST00000254066 SIGLEC16A6NMB1 481 aa21.93■■□□□ 1.1
RARA-201ENST00000254066 UPP2O95045 317 aa21.93■■□□□ 1.1
RARA-201ENST00000254066 RRP1BQ14684 758 aaKnown RBP21.93■■□□□ 1.1
RARA-201ENST00000254066 MAIP1Q8WWC4 291 aa21.93■■□□□ 1.1
RARA-201ENST00000254066 TBC1D10AQ9BXI6 508 aa21.93■■□□□ 1.1
RARA-201ENST00000254066 ADGRA3Q8IWK6 1321 aa21.93■■□□□ 1.1
RARA-201ENST00000254066 MAGEA13PA6NCF6 341 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 ERVV-1B6SEH8 477 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 MAP3K13O43283 966 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 SLC26A4O43511 780 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 BRAFP15056 766 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 SH3BGRP55822 239 aaPredicted RBP21.92■■□□□ 1.1
RARA-201ENST00000254066 LONP2Q86WA8 852 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 PRELID2Q8N945 189 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 C18orf8Q96DM3 657 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 DDX23Q9BUQ8 820 aaKnown RBP21.92■■□□□ 1.1
RARA-201ENST00000254066 MXD3Q9BW11 206 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 LGALS13Q9UHV8 139 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 SLC4A7Q9Y6M7 1214 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 ROBO3Q96MS0 1386 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 PASKQ96RG2 1323 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 KIAA1551Q9HCM1 1747 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 EIF4E1BA6NMX2 242 aaKnown RBP21.92■■□□□ 1.1
RARA-201ENST00000254066 TAC1P20366 129 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 IL9RQ01113 521 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 EPHA7Q15375 998 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 SLC15A2Q16348 729 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 HYIQ5T013 277 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 RNF220Q5VTB9 566 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 ANKRD42Q8N9B4 389 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 SLC17A8Q8NDX2 589 aa21.92■■□□□ 1.1
RARA-201ENST00000254066 UHMK1Q8TAS1 419 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms