RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 MTO1Q9Y2Z2 717 aaKnown RBP13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 AP1G2O75843 785 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 GGPS1O95749 300 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 RCN1Q15293 331 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 RINLQ6ZS11 566 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 GPR141Q7Z602 305 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 DHX40Q8IX18 779 aaKnown RBP13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 KCTD6Q8NC69 237 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 PNMA1Q8ND90 353 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 ZNF555Q8NEP9 628 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 ALKBH8Q96BT7 664 aaKnown RBP13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 CAAP1Q9H8G2 361 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 GPR108Q9NPR9 543 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 AMACRQ9UHK6 382 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 AURKCQ9UQB9 309 aa13.96□□□□□ -0.17
PCDHGA3-201ENST00000253812 CFBP00751 764 aa13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 ARL4AP40617 200 aa13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 EIF2B2P49770 351 aaKnown RBP13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 SFSWAPQ12872 951 aaKnown RBP13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 KYNUQ16719 465 aa13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 SNF8Q96H20 258 aa13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 GPR101Q96P66 508 aaPredicted RBP13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 TSSK1BQ9BXA7 367 aa13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 PSTPIP2Q9H939 334 aa13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 UBE2TQ9NPD8 197 aaPredicted RBP13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 EMILIN3Q9NT22 766 aa13.96□□□□□ -0.18
PCDHGA3-201ENST00000253812 LMTK2Q8IWU2 1503 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 LRRC53A6NM62 1247 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 PPIP5K2O43314 1243 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 HNRNPRO43390 633 aaKnown RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 LZTS3O60299 673 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 CLPTM1O96005 669 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 TMEM191BP0C7N4 346 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 IFNAR1P17181 557 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 CDH2P19022 906 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 YY1P25490 414 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 TBL3Q12788 808 aaKnown RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 ITIH4Q14624 930 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 PPM1NQ8N819 430 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 SLC17A8Q8NDX2 589 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 FAF2Q96CS3 445 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 UBN1Q9NPG3 1134 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 PNPLA6Q8IY17 1366 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 A0A1W2PQC6 194 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 FAM47DPA6NHR8 397 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 KLHL2O95198 593 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 C4BPBP20851 252 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 DOK7Q18PE1 504 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 FAM102BQ5T8I3 360 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 CCDC137Q6PK04 289 aaKnown RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 ZNF589Q86UQ0 364 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 SIX6OS1Q8N1H7 587 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 TERB1Q8NA31 727 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 TEX12Q9BXU0 123 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 VPS11Q9H270 941 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 ZNF408Q9H9D4 720 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 ARHGEF10LQ9HCE6 1279 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 NPHS2Q9NP85 383 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 GTSE1Q9NYZ3 720 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 ZNF804BA4D1E1 1349 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 TSPAN9O75954 239 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 PCP11498 1178 aaKnown RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 MLH1P40692 756 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 PIK3CAP42336 1068 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 ERFEQ4G0M1 354 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 INPP5DQ92835 1189 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 POLD4Q9HCU8 107 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 NBNO60934 754 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 WLSQ5T9L3 541 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 ARL6IP4Q66PJ3 421 aaKnown RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 GALNT4Q8N4A0 578 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 NMD3Q96D46 503 aaKnown RBP13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 NSL1Q96IY1 281 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 NACA2Q9H009 215 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 TMEM245Q9H330 911 aa13.95□□□□□ -0.18
PCDHGA3-201ENST00000253812 KLRF2D3W0D1 207 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 PI4K2BG5E9Z4 385 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 GOLGA8SH3BPF8 625 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 AKAP10O43572 662 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 MYCLP12524 364 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 PTPREP23469 700 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 MXI1P50539 228 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 CACNA2D1P54289 1103 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 GFPT1Q06210 699 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 NCAPHQ15003 741 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 EPHA10Q5JZY3 1008 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 RASGRP2Q7LDG7 609 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 ROPN1BQ9BZX4 212 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 ROPN1Q9HAT0 212 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 SLC13A4Q9UKG4 626 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 DTNAQ9Y4J8 743 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 CDC42BPGQ6DT37 1551 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 TMEM191CA6NGB0 347 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 ALDH18A1P54886 795 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 UBE3CQ15386 1083 aa13.94□□□□□ -0.18
PCDHGA3-201ENST00000253812 ZMYM1Q5SVZ6 1142 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms