RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TXLNAP40222 546 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 SLC12A3P55017 1021 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 GRIN1Q05586 938 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 MAPK7Q13164 816 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 ZRSR1Q15695 479 aaKnown RBP14.11□□□□□ -0.15
VPREB3-201ENST00000248948 MAPK6Q16659 721 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 SPOUT1Q5T280 376 aaKnown RBP14.11□□□□□ -0.15
VPREB3-201ENST00000248948 FAM173BQ6P4H8 233 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 SLC27A1Q6PCB7 646 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 C1orf186Q6ZWK4 172 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 MRPL10Q7Z7H8 261 aaKnown RBP14.11□□□□□ -0.15
VPREB3-201ENST00000248948 HACE1Q8IYU2 909 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 DAW1Q8N136 415 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 COLGALT1Q8NBJ5 622 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 SLC17A8Q8NDX2 589 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 RASSF8Q8NHQ8 419 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 HELQQ8TDG4 1101 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 CSRNP2Q9H175 543 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 FZD8Q9H461 694 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 UBN1Q9NPG3 1134 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 PLAGL2Q9UPG8 496 aa14.11□□□□□ -0.15
VPREB3-201ENST00000248948 SPTBN5Q9NRC6 3674 aaKnown RBP14.11□□□□□ -0.15
VPREB3-201ENST00000248948 XIRP2A4UGR9 3374 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 A0A1B0GUA9 196 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 ACKR2O00590 384 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 GRM6O15303 877 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 INPPL1O15357 1258 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 B4GALT5O43286 388 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 HIP1RO75146 1068 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 F13A1P00488 732 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 ITGB1P05556 798 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 PRKCBP05771 671 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 PLA2G4BP0C869 781 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 ZSCAN22P10073 491 aaPredicted RBP14.1□□□□□ -0.15
VPREB3-201ENST00000248948 PLCG1P19174 1290 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 SLC39A14Q15043 492 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 LRRC55Q6ZSA7 311 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 KLHL23Q8NBE8 558 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 URGCPQ8TCY9 931 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 ZNF396Q96N95 335 aaPredicted RBP14.1□□□□□ -0.15
VPREB3-201ENST00000248948 TRIM6Q9C030 488 aaPredicted RBP14.1□□□□□ -0.15
VPREB3-201ENST00000248948 NSUN3Q9H649 340 aaKnown RBP14.1□□□□□ -0.15
VPREB3-201ENST00000248948 RSAD1Q9HA92 442 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 TYW1Q9NV66 732 aaKnown RBP14.1□□□□□ -0.15
VPREB3-201ENST00000248948 HCSTQ9UBK5 93 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 KCNG1Q9UIX4 513 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 ODF2LQ9ULJ1 636 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 COG5Q9UP83 839 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 LZTS1Q9Y250 596 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 IPPQ9Y573 584 aa14.1□□□□□ -0.15
VPREB3-201ENST00000248948 N4BP3O15049 544 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 YEATS4O95619 227 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 SSBP05455 408 aaKnown RBP eCLIP14.09□□□□□ -0.15
VPREB3-201ENST00000248948 PRPF4BQ13523 1007 aaKnown RBP14.09□□□□□ -0.15
VPREB3-201ENST00000248948 CCDC85BQ15834 202 aaPredicted RBP14.09□□□□□ -0.15
VPREB3-201ENST00000248948 NOMO2Q5JPE7 1267 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 AGMOQ6ZNB7 445 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 THNSL1Q8IYQ7 743 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 KRI1Q8N9T8 703 aaKnown RBP14.09□□□□□ -0.15
VPREB3-201ENST00000248948 SMG8Q8ND04 991 aaKnown RBP14.09□□□□□ -0.15
VPREB3-201ENST00000248948 SPIRE2Q8WWL2 714 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 ATXN2LQ8WWM7 1075 aaKnown RBP14.09□□□□□ -0.15
VPREB3-201ENST00000248948 KCNN1Q92952 543 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 LPPQ93052 612 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 CPB2Q96IY4 423 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 ZNF558Q96NG5 402 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 KIFC3Q9BVG8 833 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 EIF2AQ9BY44 585 aaKnown RBP14.09□□□□□ -0.15
VPREB3-201ENST00000248948 TBC1D13Q9NVG8 400 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 ARHGAP28Q9P2N2 729 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 STK17AQ9UEE5 414 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 TRIP11Q15643 1979 aa14.09□□□□□ -0.15
VPREB3-201ENST00000248948 MEIS3P2A8K0S8 358 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 PPP6R2O75170 966 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 OFD1O75665 1012 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 FGF18O76093 207 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 ITGA4P13612 1032 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 SCP2P22307 547 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 MARCKSP29966 332 aaPredicted RBP14.08□□□□□ -0.16
VPREB3-201ENST00000248948 NPTX2P47972 431 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 PEX3P56589 373 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 PLCB3Q01970 1234 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 CEBPZQ03701 1054 aaKnown RBP14.08□□□□□ -0.16
VPREB3-201ENST00000248948 COL19A1Q14993 1142 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
VPREB3-201ENST00000248948 STK38Q15208 465 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 DCAF4L1Q3SXM0 396 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 ATL3Q6DD88 541 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 KCNT2Q6UVM3 1135 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 APBB1IPQ7Z5R6 666 aaPredicted RBP14.08□□□□□ -0.16
VPREB3-201ENST00000248948 LINC00301Q8NCQ3 95 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 SPPL3Q8TCT6 385 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 POF1BQ8WVV4 589 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 LARP4BQ92615 738 aaKnown RBP14.08□□□□□ -0.16
VPREB3-201ENST00000248948 RAD54LQ92698 747 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 SYMPKQ92797 1274 aaKnown RBP14.08□□□□□ -0.16
VPREB3-201ENST00000248948 PPP2R3CQ969Q6 453 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 PLIN2Q99541 437 aa14.08□□□□□ -0.16
VPREB3-201ENST00000248948 ADPGKQ9BRR6 497 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms