RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 KCNK9Q9NPC2 374 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 SMTNP53814 917 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 SOX10P56693 466 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 GPC5P78333 572 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 PPP3CAQ08209 521 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 MTMR1Q13613 665 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 UAP1Q16222 522 aaPredicted RBP13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 JAMLQ86YT9 394 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 CACNA2D3Q8IZS8 1091 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 MEFVO15553 781 aaPredicted RBP13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 ENTPD3O75355 529 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 GUCY2CP25092 1073 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 CBWD2Q8IUF1 395 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 RHOT2Q8IXI1 618 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 IL31RAQ8NI17 732 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 MKNK1Q9BUB5 465 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 VCPKMTQ9H867 229 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 MLXIPLQ9NP71 852 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 ZHX2Q9Y6X8 837 aa13.59□□□□□ -0.23
RAB3IP-201ENST00000247833 HNRNPDLO14979 420 aaKnown RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 ACSL3O95573 720 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 P4HBP07237 508 aaKnown RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 HSPA1LP34931 641 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 PDE6CP51160 858 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 JAM2P57087 298 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 BMT2Q1RMZ1 405 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 CCDC137Q6PK04 289 aaKnown RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 TMC3Q7Z5M5 1100 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 FMNL3Q8IVF7 1028 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 C1orf54Q8WWF1 131 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 PSMD1Q99460 953 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 NUP85Q9BW27 656 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 AZI2Q9H6S1 392 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 HERC5Q9UII4 1024 aaKnown RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 ODF2LQ9ULJ1 636 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 SLC26A4O43511 780 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 CAND2O75155 1236 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 QARSP47897 775 aaKnown RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 PMS2P54278 862 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 ANKRD42Q8N9B4 389 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 SLC5A5Q92911 643 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 MRRFQ96E11 262 aaKnown RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 FAM118BQ9BPY3 351 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 ERP44Q9BS26 406 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 PI4K2AQ9BTU6 479 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 TOPORSQ9NS56 1045 aaPredicted RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 ZNF70Q9UC06 446 aaPredicted RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 ITGB3BPQ13352 177 aaPredicted RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 PPP2R5AQ15172 486 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 CEP57Q86XR8 500 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 CPNE8Q86YQ8 564 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 ZNF564Q8TBZ8 553 aaPredicted RBP13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 CYFIP2Q96F07 1278 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 MXRA8Q9BRK3 442 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 USP20Q9Y2K6 914 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 TMX2Q9Y320 296 aa13.58□□□□□ -0.24
RAB3IP-201ENST00000247833 FRMPD4Q14CM0 1322 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 YWHABP31946 246 aaKnown RBP13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 GKAP1Q5VSY0 366 aaPredicted RBP13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 SLC47A2Q86VL8 602 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 GPATCH11Q8N954 259 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 DHX38Q92620 1227 aaKnown RBP13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 HES6Q96HZ4 224 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 SCLT1Q96NL6 688 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 PAIP2Q9BPZ3 127 aaKnown RBP13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 COG5Q9UP83 839 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 CD2APQ9Y5K6 639 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 NRAPQ86VF7 1730 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 ZMYM2Q9UBW7 1377 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 CYP3A4P08684 503 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 ITGB5P18084 799 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 TNNI1P19237 187 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 PPP2R5CQ13362 524 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 SLC29A2Q14542 456 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 ARHGEF16Q5VV41 709 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 MREGQ8N565 214 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 HEMGNQ9BXL5 484 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 CARD9Q9H257 536 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 INTUQ9ULD6 942 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 A0A0A6YYK5 440 aaPredicted RBP13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 SHBGP04278 402 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 MMEP08473 750 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 CRYGNQ8WXF5 182 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 KMT5AQ9NQR1 393 aa13.57□□□□□ -0.24
RAB3IP-201ENST00000247833 SPATA31A6Q5VVP1 1343 aa13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 DENND3A2RUS2 1198 aa13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 FAM107AO95990 144 aa13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 MFAP3P55082 362 aa13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 DMP1Q13316 513 aaPredicted RBP13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 LRIG3Q6UXM1 1119 aa13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 PASD1Q8IV76 773 aa13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 CEP170P1Q96L14 293 aa13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 FNBP1Q96RU3 617 aa13.56□□□□□ -0.24
RAB3IP-201ENST00000247833 CNOT8Q9UFF9 292 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms